Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.84□□□□□ -1.63
CALR3Q96L12 C4BPAP2-201ENST00000428434 478 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AC016831.4-201ENST00000438302 307 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AL714022.1-201ENST00000439897 151 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 CEACAMP7-201ENST00000444105 496 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RPL30P12-201ENST00000474666 353 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AC146944.2-203ENST00000502493 354 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 HMGB3P17-201ENST00000504195 649 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AC020593.1-201ENST00000507399 299 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AC006499.6-201ENST00000511169 607 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AC139495.1-202ENST00000513164 354 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RNA5SP154-201ENST00000516193 111 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RNU6-1338P-201ENST00000516328 91 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.84□□□□□ -1.63
CALR3Q96L12 uc_338.32-201ENST00000615087 172 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CALR3Q96L12 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CALR3Q96L12 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.84□□□□□ -1.63
CALR3Q96L12 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CALR3Q96L12 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CALR3Q96L12 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.84□□□□□ -1.64
CALR3Q96L12 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CALR3Q96L12 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CALR3Q96L12 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.83□□□□□ -1.64
CALR3Q96L12 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALR3Q96L12 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALR3Q96L12 SNORD27-201ENST00000363981 72 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 SNORA36A-201ENST00000384221 132 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 RNU6-171P-201ENST00000384354 107 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 RNU6-159P-201ENST00000391080 106 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 PTMAP5-201ENST00000393073 333 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 RNA5SP36-201ENST00000410197 133 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 SNORD12B-201ENST00000410433 91 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.83□□□□□ -1.64
CALR3Q96L12 AL358075.3-201ENST00000426289 226 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.83□□□□□ -1.64
CALR3Q96L12 WARS2P1-201ENST00000429678 537 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.83□□□□□ -1.64
CALR3Q96L12 RN7SKP49-201ENST00000516675 260 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 RNA5SP34-201ENST00000516887 130 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 RNU6-58P-201ENST00000517143 103 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 AC069240.1-201ENST00000548774 375 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 AC105129.1-201ENST00000560250 297 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 MIR3691-201ENST00000578066 90 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 AC100827.5-201ENST00000615883 426 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALR3Q96L12 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CALR3Q96L12 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CALR3Q96L12 AL353746.1-201ENST00000566293 6881 ntBASIC4.83□□□□□ -1.64
CALR3Q96L12 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALR3Q96L12 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CALR3Q96L12 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALR3Q96L12 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.82□□□□□ -1.64
CALR3Q96L12 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALR3Q96L12 RNU6-1285P-201ENST00000363480 105 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 SNORD113-8-201ENST00000363497 74 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 SNORD115-8-201ENST00000363856 82 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 SNORD115-38-201ENST00000365037 82 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 Y_RNA.352-201ENST00000365439 102 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALR3Q96L12 SNORD63-201ENST00000384262 68 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 SNORA26.3-201ENST00000391119 136 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 Y_RNA.602-201ENST00000410535 92 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 RNU2-64P-201ENST00000411315 191 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 AC023141.4-201ENST00000412031 328 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.82□□□□□ -1.64
CALR3Q96L12 RPS15AP5-201ENST00000436276 388 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 AC010099.1-201ENST00000455434 375 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 PPBPP1-201ENST00000510807 373 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 SNORD19.2-201ENST00000516978 73 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.82□□□□□ -1.64
CALR3Q96L12 AP000867.2-201ENST00000532468 320 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CALR3Q96L12 MIR5695-201ENST00000579717 85 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 AC010201.1-201ENST00000605051 540 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 AC073657.2-201ENST00000605661 303 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 AL138721.1-201ENST00000616756 179 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 U3.53-201ENST00000628922 216 ntBASIC4.82□□□□□ -1.64
CALR3Q96L12 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALR3Q96L12 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.82□□□□□ -1.64
CALR3Q96L12 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALR3Q96L12 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.82□□□□□ -1.64
CALR3Q96L12 SDAD1P1-202ENST00000524156 2051 ntBASIC4.81□□□□□ -1.64
CALR3Q96L12 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CALR3Q96L12 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CALR3Q96L12 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.81□□□□□ -1.64
CALR3Q96L12 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CALR3Q96L12 RNA5SP361-201ENST00000362686 118 ntBASIC4.81□□□□□ -1.64
CALR3Q96L12 RNU6-281P-201ENST00000384212 103 ntBASIC4.81□□□□□ -1.64
CALR3Q96L12 RNA5SP113-201ENST00000410486 84 ntBASIC4.81□□□□□ -1.64
CALR3Q96L12 AC245291.1-201ENST00000419501 328 ntBASIC4.81□□□□□ -1.64
CALR3Q96L12 AC079355.1-201ENST00000421770 223 ntBASIC4.81□□□□□ -1.64
CALR3Q96L12 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.81□□□□□ -1.64
CALR3Q96L12 SNORA71B-202ENST00000439232 272 ntBASIC4.81□□□□□ -1.64
CALR3Q96L12 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CALR3Q96L12 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CALR3Q96L12 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms