Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.05□□□□□ -2.08
USP47Q96K76 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.05□□□□□ -2.08
USP47Q96K76 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.05□□□□□ -2.08
USP47Q96K76 AC092001.1-201ENST00000453012 261 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.05□□□□□ -2.08
USP47Q96K76 RPL39P36-201ENST00000490784 156 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.05□□□□□ -2.08
USP47Q96K76 AC091951.3-201ENST00000504093 246 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 SNORA25.11-201ENST00000515935 105 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
USP47Q96K76 AC105185.1-201ENST00000518705 535 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.05□□□□□ -2.08
USP47Q96K76 DUXAP1-201ENST00000556632 463 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 AL354943.1-201ENST00000572103 781 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 BNIP3P9-201ENST00000603714 553 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.05□□□□□ -2.08
USP47Q96K76 AC022306.3-201ENST00000619930 550 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USP47Q96K76 AC103706.2-201ENST00000638080 240 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 MTND4P16-201ENST00000466108 1367 ntBASIC2.05□□□□□ -2.08
USP47Q96K76 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.04□□□□□ -2.08
USP47Q96K76 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.04□□□□□ -2.08
USP47Q96K76 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USP47Q96K76 AL596028.1-201ENST00000326971 197 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 RNY1P14-201ENST00000384426 108 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 RNU6-83P-201ENST00000384568 112 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.04□□□□□ -2.08
USP47Q96K76 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.04□□□□□ -2.08
USP47Q96K76 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.04□□□□□ -2.08
USP47Q96K76 AL136380.1-201ENST00000447970 162 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.04□□□□□ -2.08
USP47Q96K76 RNU1-92P-201ENST00000517017 135 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
USP47Q96K76 CBX3P7-201ENST00000532876 502 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 AC023050.2-201ENST00000544968 387 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.04□□□□□ -2.08
USP47Q96K76 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.04□□□□□ -2.08
USP47Q96K76 AC009127.3-201ENST00000570531 403 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 AC105245.1-201ENST00000581934 244 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
USP47Q96K76 AC007363.1-201ENST00000604736 620 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 AC021755.4-201ENST00000616620 456 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 AC012640.5-201ENST00000623897 319 ntBASIC2.04□□□□□ -2.08
USP47Q96K76 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.03□□□□□ -2.08
USP47Q96K76 RNU6-486P-201ENST00000363116 107 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 RNU6-1280P-201ENST00000365211 107 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USP47Q96K76 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.03□□□□□ -2.08
USP47Q96K76 EIF4EP4-201ENST00000424916 578 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.03□□□□□ -2.08
USP47Q96K76 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.03□□□□□ -2.08
USP47Q96K76 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.03□□□□□ -2.08
USP47Q96K76 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.03□□□□□ -2.08
USP47Q96K76 RPS29P29-201ENST00000456396 171 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 MTATP6P9-201ENST00000515039 680 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 RNA5SP112-201ENST00000515937 99 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 MIR892C-201ENST00000516410 77 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 AL133241.1-201ENST00000556832 487 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.03□□□□□ -2.08
USP47Q96K76 AC098848.2-201ENST00000588023 330 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 MTCYBP22-201ENST00000603788 447 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 AL157834.3-201ENST00000615543 103 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 ZNF209P-201ENST00000593450 2304 ntBASIC2.03□□□□□ -2.08
USP47Q96K76 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USP47Q96K76 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USP47Q96K76 Y_RNA.191-201ENST00000363972 113 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 RNY3P13-201ENST00000365542 102 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 RPS12P24-201ENST00000412619 387 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 OR51A5P-201ENST00000415429 942 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.02□□□□□ -2.09
USP47Q96K76 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.02□□□□□ -2.09
USP47Q96K76 RAC1P6-201ENST00000423911 575 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.02□□□□□ -2.09
USP47Q96K76 BRK1P2-201ENST00000442875 223 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 RNU1-123P-201ENST00000458950 160 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.02□□□□□ -2.09
USP47Q96K76 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.02□□□□□ -2.09
USP47Q96K76 RPL36AP48-201ENST00000485521 314 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AC116655.1-201ENST00000508324 901 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 HSPE1P23-201ENST00000509838 286 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.02□□□□□ -2.09
USP47Q96K76 LINC00933-203ENST00000559812 219 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.02□□□□□ -2.09
USP47Q96K76 AL356432.3-201ENST00000568952 465 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.02□□□□□ -2.09
USP47Q96K76 BNIP3P40-201ENST00000596017 556 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AL358072.1-201ENST00000604156 575 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AL607023.1-201ENST00000620045 248 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.02□□□□□ -2.09
USP47Q96K76 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USP47Q96K76 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
USP47Q96K76 MTND5P35-201ENST00000557537 1720 ntBASIC2.02□□□□□ -2.09
USP47Q96K76 RNU6-931P-201ENST00000363850 107 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 MIR7-2-201ENST00000384970 110 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USP47Q96K76 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.01□□□□□ -2.09
USP47Q96K76 U3.40-201ENST00000408706 208 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 MTCO2P8-201ENST00000412213 658 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 ELOCP17-201ENST00000414751 326 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 AC097463.2-201ENST00000421074 142 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms