Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL360219.1-201ENST00000610230 366 ntBASIC2.47□□□□□ -2.01
VMP1Q96GC9 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
VMP1Q96GC9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
VMP1Q96GC9 OR4G2P-201ENST00000328113 903 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 U8.3-201ENST00000363321 132 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 RNU6-371P-201ENST00000364283 108 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 SNORA16B-201ENST00000364674 135 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 SNORD116-20-201ENST00000384529 92 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 MIR17-201ENST00000385012 84 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 AL356057.3-201ENST00000402607 340 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 U3.40-201ENST00000408706 208 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 RNU6-1140P-201ENST00000410517 106 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 RPS3AP3-201ENST00000411933 242 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AL356379.1-201ENST00000414105 126 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 RPL21P90-201ENST00000415692 466 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 PGBD4P6-201ENST00000421501 610 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 RPS3P1-201ENST00000456781 192 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AC107032.1-201ENST00000485945 480 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 AC091965.2-201ENST00000512324 613 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 SCARNA24.1-201ENST00000516465 137 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 Y_RNA.687-201ENST00000516558 91 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 RNU6-1220P-201ENST00000517126 108 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 RNU6-586P-201ENST00000517265 104 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 MTCYBP20-201ENST00000524239 1129 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 PRELID2P1-201ENST00000552837 301 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 SNORD53-201ENST00000579969 78 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AC007229.1-201ENST00000590455 412 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AL121992.2-201ENST00000606262 256 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AC098614.4-201ENST00000607601 462 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 MIR6852-201ENST00000621699 66 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AL031601.2-202ENST00000622650 282 ntBASIC2.46□□□□□ -2.02
VMP1Q96GC9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
VMP1Q96GC9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 RNY4P34-201ENST00000364779 95 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 RNU6-384P-201ENST00000364900 104 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 RPS4XP8-201ENST00000402039 771 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 AL365203.2-201ENST00000423444 196 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 MTCYBP5-201ENST00000423752 1135 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 CALM2P2-201ENST00000428512 440 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 MTATP6P16-201ENST00000434543 526 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 AC073614.1-201ENST00000438690 650 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 AL360271.2-201ENST00000447710 161 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 AC108938.1-201ENST00000451204 136 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 RNA5SP233-201ENST00000459153 113 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 SNORA59A-201ENST00000459326 152 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 AC055731.1-201ENST00000474387 401 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 RNA5SP282-201ENST00000516355 108 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 MIR514B-201ENST00000516774 80 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 RNA5SP137-201ENST00000516833 135 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 AC087883.1-201ENST00000551882 391 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 MIR4529-201ENST00000578110 78 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 AC009159.2-201ENST00000617603 606 ntBASIC2.45□□□□□ -2.02
VMP1Q96GC9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.45□□□□□ -2.02
VMP1Q96GC9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AP006437.1-201ENST00000641440 3685 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AL445529.1-201ENST00000398713 389 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 AL591034.2-201ENST00000402839 359 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC107222.1-201ENST00000510899 637 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 RNU6-685P-201ENST00000517088 95 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 SNORA31.23-201ENST00000517219 133 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 RNU2-19P-201ENST00000517288 84 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC107953.1-201ENST00000522216 297 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC022202.1-201ENST00000613515 211 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC008250.2-201ENST00000615261 205 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC138649.3-201ENST00000622154 254 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VMP1Q96GC9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
VMP1Q96GC9 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
VMP1Q96GC9 SNORD62.1-201ENST00000362541 86 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 RNU6-622P-201ENST00000384272 103 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 RAP1BP3-201ENST00000407180 549 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms