Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 MTND4P35-201ENST00000604257 1375 ntBASIC2.74□□□□□ -1.97
SLC47A1Q96FL8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLC47A1Q96FL8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 RNU6-270P-201ENST00000364131 105 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 MIR578-201ENST00000384828 96 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 SNORA16.2-201ENST00000390991 127 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 RPL21P90-201ENST00000415692 466 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 ERLEC1P1-201ENST00000433806 578 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AL121601.2-201ENST00000438019 707 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 MTCO3P18-201ENST00000440206 761 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AL360271.2-201ENST00000447710 161 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 RPS27AP9-201ENST00000477681 438 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC091885.1-201ENST00000506658 268 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC112206.3-201ENST00000514578 389 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 LRRC34P2-201ENST00000514850 553 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 RNU6-1038P-201ENST00000516516 104 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AP000867.2-201ENST00000532468 320 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC078814.3-201ENST00000553036 491 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AL118558.2-201ENST00000556294 238 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 MIR5692A1-201ENST00000580523 69 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 RNU6-89P-201ENST00000606519 100 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 DUSP12P1-201ENST00000612874 516 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 AP003400.5-201ENST00000624827 617 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 CASC19-280ENST00000642102 1351 ntBASIC2.73□□□□□ -1.97
SLC47A1Q96FL8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 RNU6-371P-201ENST00000364283 108 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 Y_RNA.390-201ENST00000383932 102 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 SNORA75B-201ENST00000384053 137 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 RNU6-45P-201ENST00000384471 107 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 RNU6-393P-201ENST00000384475 107 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 MIR627-201ENST00000384979 97 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AL356057.2-201ENST00000403318 432 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC099548.1-201ENST00000421443 426 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 SRIP2-201ENST00000428470 166 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC117440.1-201ENST00000474107 571 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC022493.1-201ENST00000492984 337 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC104136.1-201ENST00000512969 394 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 RN7SKP40-201ENST00000517211 242 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC009902.1-201ENST00000519351 183 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AF235103.2-201ENST00000525753 346 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 CENPUP1-201ENST00000526649 1202 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 H3F3AP1-201ENST00000559984 334 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 AC099654.14-201ENST00000638599 341 ntBASIC2.72□□□□□ -1.97
SLC47A1Q96FL8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 Y_RNA.157-201ENST00000363638 102 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 RNU6-434P-201ENST00000384376 107 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 RNU6-1179P-201ENST00000384667 107 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 MIR128-1-201ENST00000384921 82 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 RNU6-876P-201ENST00000391295 104 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 FGF7P8-201ENST00000402994 292 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 AL356776.1-201ENST00000406574 447 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 ARL5AP1-201ENST00000418991 388 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 MTND4LP11-201ENST00000422184 280 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 MYL8P-204ENST00000431574 518 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 HMGN2P26-201ENST00000463169 339 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 RN7SL297P-201ENST00000483161 293 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 Y_RNA.654-201ENST00000497848 106 ntBASIC2.71□□□□□ -1.98
SLC47A1Q96FL8 AC008716.1-201ENST00000511084 513 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms