Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL356421.1-201ENST00000403255 413 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 RNU2-63P-201ENST00000410792 194 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 Y_RNA.630-201ENST00000411370 108 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 RPL37P21-201ENST00000435890 276 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 MTND5P14-201ENST00000441481 1267 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AC117503.1-201ENST00000472241 394 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 RNY4-201ENST00000516507 96 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 SNORD19.2-201ENST00000516978 73 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AP003327.1-201ENST00000529684 127 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 AL662814.1-201ENST00000617364 121 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AC073308.1-201ENST00000623696 305 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AL359854.1-201ENST00000614203 1594 ntBASIC0.59□□□□□ -2.31
TTC28Q96AY4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.59□□□□□ -2.31
TTC28Q96AY4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.32
TTC28Q96AY4 MIR601-201ENST00000385256 79 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 AL355615.1-201ENST00000406187 641 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 AL590383.1-201ENST00000428602 75 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 AC092393.1-201ENST00000439625 742 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.59□□□□□ -2.32
TTC28Q96AY4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.59□□□□□ -2.32
TTC28Q96AY4 COX7A2P2-201ENST00000505291 250 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.59□□□□□ -2.32
TTC28Q96AY4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.59□□□□□ -2.32
TTC28Q96AY4 AC004908.2-201ENST00000609090 574 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 FTX_3.1-201ENST00000610451 147 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 AC109454.4-201ENST00000623411 649 ntBASIC0.59□□□□□ -2.32
TTC28Q96AY4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
TTC28Q96AY4 CBX3P1-201ENST00000325243 554 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNU6-217P-201ENST00000384164 104 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AP002784.2-201ENST00000397300 549 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 HMGB1P17-201ENST00000403495 628 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC098831.1-201ENST00000440661 216 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 HSPE1P24-201ENST00000450782 238 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AP1S2P1-201ENST00000457344 379 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 LARP1BP2-201ENST00000486594 519 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNA5SP135-201ENST00000517019 125 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 MTCYBP23-201ENST00000558717 1102 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC021739.1-201ENST00000559631 174 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 AL161729.4-201ENST00000604650 476 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC004492.1-201ENST00000607036 742 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC090772.4-201ENST00000623599 362 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 AL356473.1-201ENST00000406203 1408 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNU6-619P-201ENST00000365146 108 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNU6-878P-201ENST00000384578 110 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 SNORA8.3-201ENST00000384679 139 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TTC28Q96AY4 TAF9BP2-201ENST00000400856 499 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC083875.1-201ENST00000419509 405 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 FAM204CP-201ENST00000424489 642 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 SNORD57-201ENST00000448188 72 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNU6-953P-201ENST00000459154 107 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 RPL32P14-201ENST00000463196 378 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC027575.1-201ENST00000481064 460 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC013828.1-201ENST00000481845 158 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.58□□□□□ -2.32
TTC28Q96AY4 MTCO1P31-201ENST00000506355 492 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AL022067.1-201ENST00000602426 454 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC068276.1-201ENST00000605793 379 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC018638.7-201ENST00000605836 1114 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC069294.1-201ENST00000608397 350 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 AC007490.1-201ENST00000624321 703 ntBASIC0.58□□□□□ -2.32
TTC28Q96AY4 RNU6-251P-201ENST00000363235 104 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 Y_RNA.181-201ENST00000363872 101 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 MIR135A2-201ENST00000384854 100 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 MIR1290-201ENST00000408735 78 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 USP9YP21-201ENST00000420603 432 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AL590556.1-201ENST00000423231 483 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC092170.1-201ENST00000440211 356 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 SUMO2P2-201ENST00000456482 255 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 RNA5SP112-201ENST00000515937 99 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 SCARNA15.2-201ENST00000516409 127 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 RNU6-362P-201ENST00000516736 90 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC009268.1-201ENST00000561352 1203 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 MIR3681-201ENST00000580089 72 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC097372.5-201ENST00000623665 376 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC112487.2-201ENST00000637950 304 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms