Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 AC090617.7-201ENST00000623952 126 ntBASIC4.04□□□□□ -1.76
UBXN4Q92575 AC138627.2-201ENST00000624202 601 ntBASIC4.04□□□□□ -1.76
UBXN4Q92575 AL021368.2-201ENST00000606125 5352 ntBASIC4.04□□□□□ -1.76
UBXN4Q92575 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBXN4Q92575 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBXN4Q92575 RNU6-593P-201ENST00000364716 112 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 Y_RNA.384-201ENST00000383909 102 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 RNU6-306P-201ENST00000384617 107 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 AL513475.1-201ENST00000406602 315 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 RNA5SP390-201ENST00000410191 113 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 RN7SKP158-201ENST00000410453 326 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.03□□□□□ -1.76
UBXN4Q92575 AC006989.1-201ENST00000427212 131 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 RN7SL604P-201ENST00000492589 296 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 RPL22P13-201ENST00000493291 347 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 AC116337.1-201ENST00000509680 687 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.03□□□□□ -1.76
UBXN4Q92575 RNU6-612P-201ENST00000516909 102 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.03□□□□□ -1.76
UBXN4Q92575 RPS3AP23-202ENST00000574601 686 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.03□□□□□ -1.76
UBXN4Q92575 RPS15AP11-201ENST00000594193 385 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 AC113139.1-201ENST00000605049 239 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 AC018889.1-201ENST00000605372 397 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.03□□□□□ -1.76
UBXN4Q92575 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.03□□□□□ -1.76
UBXN4Q92575 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.03□□□□□ -1.76
UBXN4Q92575 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.03□□□□□ -1.76
UBXN4Q92575 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UBXN4Q92575 MTND5P30-201ENST00000452896 1731 ntBASIC4.03□□□□□ -1.76
UBXN4Q92575 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.02□□□□□ -1.77
UBXN4Q92575 Y_RNA.126-201ENST00000363382 111 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 RNU6-601P-201ENST00000384540 107 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 MIR544A-201ENST00000384855 91 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 MIR521-1-201ENST00000384902 87 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.02□□□□□ -1.77
UBXN4Q92575 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.02□□□□□ -1.77
UBXN4Q92575 FABP5P14-201ENST00000437273 393 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 RPS4XP22-201ENST00000480755 780 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 RPL36AP48-201ENST00000485521 314 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.02□□□□□ -1.77
UBXN4Q92575 AC097462.2-201ENST00000504623 481 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 SCARNA17.1-201ENST00000516211 143 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 SCARNA17.2-201ENST00000516334 143 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 AP005902.1-201ENST00000521358 186 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.02□□□□□ -1.77
UBXN4Q92575 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.02□□□□□ -1.77
UBXN4Q92575 AC090897.2-201ENST00000581715 130 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 MIR4765-201ENST00000585007 77 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 POLR3GP2-201ENST00000588366 668 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.02□□□□□ -1.77
UBXN4Q92575 AL133215.3-201ENST00000609801 448 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 MIR6867-201ENST00000610636 67 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 SCARNA17.4-201ENST00000614296 143 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 AC009233.1-201ENST00000616477 371 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 AC241585.2-209ENST00000638217 143 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.02□□□□□ -1.77
UBXN4Q92575 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.02□□□□□ -1.77
UBXN4Q92575 AL359854.1-201ENST00000614203 1594 ntBASIC4.02□□□□□ -1.77
UBXN4Q92575 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
UBXN4Q92575 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.01□□□□□ -1.77
UBXN4Q92575 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UBXN4Q92575 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UBXN4Q92575 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UBXN4Q92575 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UBXN4Q92575 SNORD114-19-201ENST00000363072 75 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 Y_RNA.339-201ENST00000365325 102 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 BTF3L4P2-201ENST00000392798 346 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 MIR1289-1-201ENST00000408836 144 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.01□□□□□ -1.77
UBXN4Q92575 DAP3P1-201ENST00000441522 278 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AC243964.1-201ENST00000441814 261 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 SNRPGP7-201ENST00000469016 106 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 RN7SL601P-201ENST00000471221 293 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.01□□□□□ -1.77
UBXN4Q92575 ACA59.1-201ENST00000515966 143 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 SCARNA11.3-201ENST00000517276 130 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.01□□□□□ -1.77
UBXN4Q92575 CKS1BP7-201ENST00000522230 235 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.01□□□□□ -1.77
UBXN4Q92575 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.01□□□□□ -1.77
UBXN4Q92575 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.01□□□□□ -1.77
UBXN4Q92575 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.01□□□□□ -1.77
UBXN4Q92575 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.01□□□□□ -1.77
UBXN4Q92575 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.01□□□□□ -1.77
UBXN4Q92575 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.01□□□□□ -1.77
UBXN4Q92575 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.01□□□□□ -1.77
UBXN4Q92575 AC012493.2-201ENST00000595083 291 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AC099778.2-201ENST00000610904 211 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AC104985.2-201ENST00000620598 500 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AC112487.2-201ENST00000637950 304 ntBASIC4.01□□□□□ -1.77
UBXN4Q92575 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.01□□□□□ -1.77
UBXN4Q92575 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.01□□□□□ -1.77
UBXN4Q92575 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.01□□□□□ -1.77
UBXN4Q92575 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UBXN4Q92575 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
UBXN4Q92575 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
UBXN4Q92575 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4□□□□□ -1.77
UBXN4Q92575 AL109809.4-201ENST00000603520 2185 ntBASIC4□□□□□ -1.77
UBXN4Q92575 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms