Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 RNU6-701P-201ENST00000384059 107 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 MIR1289-2-201ENST00000408360 111 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 MTCO2P20-201ENST00000437339 673 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 RNU6-586P-201ENST00000517265 104 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AC068587.4-201ENST00000533893 186 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AC136619.2-201ENST00000563361 631 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AC107952.2-201ENST00000606048 486 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 MIR6845-201ENST00000613182 61 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 RNU6-1032P-201ENST00000384100 107 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 MIR30A-201ENST00000385092 71 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 MIR301A-201ENST00000385261 86 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 RNU11-3P-201ENST00000391111 133 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 RNU4-22P-201ENST00000411058 166 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 PIGPP2-201ENST00000411569 458 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC009310.1-201ENST00000414414 451 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL591806.2-201ENST00000433122 173 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 TIMM9P1-201ENST00000436122 256 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 RNU6-953P-201ENST00000459154 107 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC021146.2-201ENST00000504736 556 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC116337.1-201ENST00000509680 687 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 RNU6-237P-201ENST00000515985 71 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 SNORA31.19-201ENST00000517079 126 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 CYCSP27-201ENST00000527643 293 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AP000907.2-201ENST00000530827 353 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 MIR544B-201ENST00000582372 78 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL670379.6-201ENST00000603753 252 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL670379.11-201ENST00000604059 253 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC008162.1-201ENST00000604718 254 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL670379.1-201ENST00000604752 252 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL670379.5-201ENST00000605253 252 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL670379.12-201ENST00000605291 253 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL670379.8-201ENST00000605353 252 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL670379.7-201ENST00000605823 252 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC018638.7-201ENST00000605836 1114 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC096772.1-201ENST00000609146 564 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AL365204.3-201ENST00000612448 685 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 AC091965.5-201ENST00000624785 342 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 MTND5P42-201ENST00000637720 498 ntBASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLHC1Q8NHS4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 RNU6-723P-201ENST00000383973 107 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 U8.13-201ENST00000390842 128 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC119751.3-201ENST00000399720 670 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC003071.1-201ENST00000451219 789 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 BTF3P15-201ENST00000455606 336 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 RNU6-295P-201ENST00000516901 104 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC023813.2-201ENST00000564321 469 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 RPL30P11-203ENST00000598995 310 ntBASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.55□□□□□ -2.16
CLHC1Q8NHS4 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 RNU6-433P-201ENST00000363216 104 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 RNU6-166P-201ENST00000384371 107 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 VPS26BP1-201ENST00000417155 755 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 BX510359.4-201ENST00000423750 193 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 RAC1P6-201ENST00000423911 575 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 AL078601.1-201ENST00000444542 271 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 HMGN2P23-201ENST00000456759 269 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 RPS3AP22-201ENST00000488297 769 ntBASIC1.54□□□□□ -2.16
CLHC1Q8NHS4 FAM92A1P2-202ENST00000504766 877 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 419.3 ms