Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SPTSSBQ8NFR3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 RNU6-529P-201ENST00000363383 104 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 RNU6-944P-201ENST00000364023 107 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 MIR186-201ENST00000384988 86 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 RNU4-26P-201ENST00000410270 107 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 RNU6-575P-201ENST00000411326 105 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 LUZP4P1-201ENST00000415420 344 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 MTCO2P5-201ENST00000422621 426 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 BRK1P2-201ENST00000442875 223 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 FDX1P2-201ENST00000450769 375 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 RN7SKP210-201ENST00000459176 261 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 MTCO3P42-201ENST00000509488 518 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 MTCO3P39-201ENST00000514812 518 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC110760.3-202ENST00000515177 371 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 MIR4513-201ENST00000581077 86 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC012065.4-201ENST00000602445 679 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC105129.3-201ENST00000605455 485 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AL157834.3-201ENST00000615543 103 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 RMST_10.1-201ENST00000616309 154 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC009269.6-201ENST00000621778 588 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC009268.2-201ENST00000621925 457 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 AC091895.1-201ENST00000624494 256 ntBASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SPTSSBQ8NFR3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 SNORA7.1-201ENST00000363750 139 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 SNORA4.1-201ENST00000364263 144 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AL121882.1-201ENST00000422893 417 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 KATNBL1P3-201ENST00000443475 909 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AL096829.2-201ENST00000446582 742 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 RPS29P29-201ENST00000456396 171 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 TMEM251P1-201ENST00000503717 318 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-322P-201ENST00000516010 103 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AC022861.1-201ENST00000522981 663 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AC087441.2-201ENST00000529141 262 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 DNAJC19P9-201ENST00000555084 351 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AP005136.1-201ENST00000579765 429 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AL365204.3-201ENST00000612448 685 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AL590240.4-201ENST00000616908 390 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AC093648.1-201ENST00000623546 606 ntBASIC0.4□□□□□ -2.35
SPTSSBQ8NFR3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-28P-201ENST00000362378 107 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 MIR194-1-201ENST00000384892 85 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 MIR532-201ENST00000385025 91 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 DHFRP6-201ENST00000401776 268 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-733P-201ENST00000410759 104 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 Z92545.1-201ENST00000411782 234 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 MTND1P21-201ENST00000412991 285 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 CBX3P6-201ENST00000430257 527 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 GTF2IP3-201ENST00000433887 494 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 HSPE1P9-201ENST00000440046 311 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 HMGN2P9-201ENST00000476875 229 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 RPS3AP22-201ENST00000488297 769 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 AC134050.1-201ENST00000495088 933 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 RN7SKP88-201ENST00000516847 250 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 AC103833.1-201ENST00000517442 172 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 AC093012.1-202ENST00000549403 582 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 AC233266.2-201ENST00000567067 528 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 MIR3664-201ENST00000579074 99 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 7SK.8-201ENST00000612110 250 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 AC130324.3-201ENST00000614165 542 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 7SK.11-201ENST00000615477 250 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 7SK.13-201ENST00000622040 250 ntBASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
SPTSSBQ8NFR3 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-223P-201ENST00000362830 107 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms