Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 MIR19A-201ENST00000384878 82 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 MIR499A-201ENST00000384903 122 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 MIR1284-201ENST00000408337 120 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 RNU6-174P-201ENST00000410406 106 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 RNU2-72P-201ENST00000411175 163 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 OR51A5P-201ENST00000415429 942 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 USP9YP11-201ENST00000427537 717 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 RPL7P34-201ENST00000433316 712 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 SNRPEP7-201ENST00000438350 220 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 ELOCP30-201ENST00000447108 299 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AL137159.1-201ENST00000452808 512 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC092001.1-201ENST00000453012 261 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 RPF2P2-201ENST00000504693 896 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 MTND2P31-201ENST00000512602 616 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 RN7SKP179-201ENST00000516126 217 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 RNU6-1183P-201ENST00000517054 60 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC026271.5-201ENST00000577873 130 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC112220.2-201ENST00000605513 533 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC006270.3-201ENST00000605967 1036 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC013470.4-201ENST00000619978 986 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 AC138627.2-201ENST00000624202 601 ntBASIC1.45□□□□□ -2.18
CCDC112Q8NEF3 MIR424-201ENST00000362227 98 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 SNORD115-3-201ENST00000363100 82 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 RNU6-560P-201ENST00000364007 108 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 RNU6-853P-201ENST00000364306 107 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 RNU2-41P-201ENST00000410991 178 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 HMGB1P31-201ENST00000437242 427 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC005094.1-201ENST00000440420 368 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AP000542.1-201ENST00000448473 371 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 SNRPGP9-201ENST00000456025 225 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 RNA5SP57-201ENST00000459463 123 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC112771.1-201ENST00000463581 102 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC079598.5-201ENST00000547460 117 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 MIR4293-201ENST00000584305 78 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AL158211.2-201ENST00000607282 395 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AL133445.2-201ENST00000611191 527 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 MIR8070-201ENST00000616510 88 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 MIR6134-201ENST00000617606 109 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 AC112204.3-201ENST00000623822 332 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 PCMTD1P7-201ENST00000634506 357 ntBASIC1.44□□□□□ -2.18
CCDC112Q8NEF3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AP000275.1-201ENST00000411943 390 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AL353621.1-201ENST00000418219 243 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 EIF4EP2-201ENST00000422816 654 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AL353706.1-201ENST00000436728 494 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 MTCO1P27-201ENST00000448269 226 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AC114801.2-201ENST00000503825 781 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 SUMO2P5-201ENST00000506790 245 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AC021146.8-201ENST00000507455 733 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 RNU6-678P-201ENST00000516832 109 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AC068620.3-201ENST00000602749 560 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 NDUFA8P1-201ENST00000605525 367 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AL050343.2-201ENST00000607338 280 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 AC092953.2-201ENST00000608000 699 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
CCDC112Q8NEF3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 Y_RNA.311-201ENST00000365068 96 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 RNU6-298P-201ENST00000390888 96 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms