Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL079305.1-201ENST00000623159 3008 ntBASIC3.6□□□□□ -1.83
SIMC1Q8NDZ2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIMC1Q8NDZ2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SIMC1Q8NDZ2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SIMC1Q8NDZ2 AC233263.6-201ENST00000631132 1963 ntBASIC3.6□□□□□ -1.83
SIMC1Q8NDZ2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIMC1Q8NDZ2 AC005592.1-201ENST00000566527 1640 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 Y_RNA.245-201ENST00000364493 95 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RPS4XP7-201ENST00000406274 780 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RNA5SP38-201ENST00000410750 119 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RNU6-847P-201ENST00000411115 108 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 Z99755.1-201ENST00000414048 380 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC092809.3-201ENST00000415453 231 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC002075.2-201ENST00000425207 252 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 GOT2P5-201ENST00000433995 546 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 U3.44-201ENST00000458938 192 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC022493.2-201ENST00000506122 481 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC116655.1-201ENST00000508324 901 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 SCARNA16.2-201ENST00000516520 172 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RNA5SP384-201ENST00000516615 116 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RNU6-677P-201ENST00000516914 101 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RNU6-143P-201ENST00000516942 93 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 RNA5SP290-201ENST00000517133 127 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 SNORD116.3-201ENST00000517176 78 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC009812.2-201ENST00000517657 457 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AP006587.4-201ENST00000526053 529 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 CYCSP27-201ENST00000527643 293 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC026371.1-201ENST00000551867 419 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC011494.1-201ENST00000596454 237 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 AC019176.2-201ENST00000611579 315 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 MIR7153-201ENST00000637758 57 ntBASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIMC1Q8NDZ2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.59□□□□□ -1.84
SIMC1Q8NDZ2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.59□□□□□ -1.84
SIMC1Q8NDZ2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
SIMC1Q8NDZ2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SIMC1Q8NDZ2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SIMC1Q8NDZ2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 SNORD62.1-201ENST00000362541 86 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 RNU1-115P-201ENST00000365329 160 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.389-201ENST00000383924 113 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.428-201ENST00000384078 102 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-1035P-201ENST00000384477 107 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-306P-201ENST00000384617 107 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 MIR199A2-201ENST00000385289 110 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC243428.1-201ENST00000421099 264 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC092047.1-201ENST00000424997 240 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 USMG5P1-201ENST00000425964 177 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 USP9YP30-201ENST00000430729 455 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 RN7SL323P-201ENST00000494712 295 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC026801.1-201ENST00000497178 464 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 SNORA31.3-201ENST00000516029 96 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 SNORD59.2-201ENST00000516873 68 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 GNAI2P1-201ENST00000541815 315 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC092447.9-201ENST00000603395 144 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AL161423.1-201ENST00000613700 262 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AL359547.2-201ENST00000615810 418 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC012314.7-201ENST00000619693 93 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 AC005183.1-201ENST00000603687 1979 ntBASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
SIMC1Q8NDZ2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 MFSD8-236ENST00000641509 4050 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-1167P-201ENST00000363227 94 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-379P-201ENST00000363813 104 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms