Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MTND1P26-201ENST00000440488 538 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 Z75741.1-201ENST00000446793 314 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 RPS29P15-201ENST00000458329 171 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC008155.2-201ENST00000464337 397 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC090525.1-201ENST00000479116 478 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC068781.1-201ENST00000488231 618 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC080014.1-201ENST00000496877 1201 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC083906.5-201ENST00000503722 328 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 RN7SKP256-201ENST00000517201 314 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC109479.2-201ENST00000517842 174 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 MTCO3P23-201ENST00000561363 289 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 MIR5004-201ENST00000579078 107 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC078899.2-201ENST00000595282 212 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AL136363.2-201ENST00000604173 851 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 YPEL5P2-201ENST00000605553 359 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC136475.10-201ENST00000620253 385 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AL031601.2-202ENST00000622650 282 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 AC022418.1-201ENST00000624118 445 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 U4.7-201ENST00000638126 106 ntBASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01561Q8N1V8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 Y_RNA.553-201ENST00000384670 102 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AL121594.1-201ENST00000475906 575 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 HMGB3P3-201ENST00000510526 400 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 RN7SKP298-201ENST00000515950 94 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 RNU6-1178P-201ENST00000516674 107 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 RNA5SP137-201ENST00000516833 135 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 RNU6-586P-201ENST00000517265 104 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 MTND2P38-201ENST00000522536 667 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AGGF1P4-201ENST00000568249 801 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC060766.3-201ENST00000591442 263 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC073648.5-201ENST00000603502 305 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AC091834.1-201ENST00000614543 472 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01561Q8N1V8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 ZNF680P1-201ENST00000436625 1469 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 Y_RNA.324-201ENST00000365165 102 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 Y_RNA.399-201ENST00000383955 105 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 RNU6-517P-201ENST00000384362 110 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 RNU6-393P-201ENST00000384475 107 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 MIR29B2-201ENST00000385055 81 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 PTMAP2-201ENST00000397627 327 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 MIR1193-201ENST00000408109 78 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 RNA5SP270-201ENST00000411361 118 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 RN7SL807P-201ENST00000470923 297 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC097462.2-201ENST00000504623 481 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 HMGB1P29-201ENST00000505659 499 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC117532.1-201ENST00000514638 323 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 RNU1-45P-201ENST00000517191 141 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC106785.1-201ENST00000565935 262 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC093249.1-201ENST00000567049 203 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AL356575.1-201ENST00000603008 283 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AL161423.1-201ENST00000613700 262 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AL159153.1-201ENST00000619688 317 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC034229.5-201ENST00000624258 185 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 AC000403.1-201ENST00000613696 3585 ntBASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
LINC01561Q8N1V8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.9□□□□□ -2.1
LINC01561Q8N1V8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
LINC01561Q8N1V8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.9□□□□□ -2.1
LINC01561Q8N1V8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC092593.1-201ENST00000515413 1815 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 SNORD116-9-201ENST00000384000 95 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms