Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RNA5SP103-201ENST00000459503 118 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RN7SL610P-201ENST00000463845 291 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RNU6-1007P-201ENST00000516586 107 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 RNA5SP34-201ENST00000516887 130 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AC011447.4-201ENST00000587562 111 ntBASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC116Q8IYX3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 SNURFL-201ENST00000309296 343 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 SNORA74A-201ENST00000364089 198 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RNU6-335P-201ENST00000364563 113 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RNA5SP267-201ENST00000364893 126 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 U3.40-201ENST00000408706 208 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AL160275.2-201ENST00000412010 394 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RPL26P27-201ENST00000414397 437 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RPL35AP21-201ENST00000437667 333 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AL135790.2-201ENST00000437701 267 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RPL34P20-201ENST00000442771 351 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AL354714.3-201ENST00000447284 493 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RNU7-107P-201ENST00000459121 61 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 UQCRHP4-201ENST00000471686 272 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC092991.1-201ENST00000477176 376 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC008953.1-201ENST00000497334 318 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 HMGB1P22-201ENST00000505315 124 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RN7SKP179-201ENST00000516126 217 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 Y_RNA.709-201ENST00000516952 92 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 RNU2-12P-201ENST00000517216 168 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC136628.3-201ENST00000521868 290 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 MIR3691-201ENST00000578066 90 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AC083809.1-201ENST00000615051 472 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 AL133412.1-201ENST00000380194 2992 ntBASIC4.71□□□□□ -1.66
CCDC116Q8IYX3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AF127577.6-201ENST00000623352 2191 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RNU6-727P-201ENST00000363592 107 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RNU6-245P-201ENST00000384020 107 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 Y_RNA.525-201ENST00000384570 113 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 Y_RNA.572-201ENST00000384757 98 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 MIR325-201ENST00000385260 98 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 TOMM22P1-201ENST00000418578 312 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AC092047.1-201ENST00000424997 240 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RPS29P9-201ENST00000440360 171 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AL357134.1-201ENST00000445848 426 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 snoU13.24-201ENST00000458998 104 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AC073073.1-201ENST00000493920 463 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 COX6B1P5-201ENST00000509843 249 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 SCARNA8-201ENST00000515924 131 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RNA5SP76-201ENST00000516277 87 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RN7SKP66-201ENST00000516681 231 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RNU6-453P-201ENST00000516819 85 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AC092490.3-201ENST00000545370 572 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 AC087783.2-201ENST00000605070 562 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 U2.21-201ENST00000637295 81 ntBASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC116Q8IYX3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AC073073.2-201ENST00000609827 2578 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 AC134026.1-201ENST00000623249 2239 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.69□□□□□ -1.66
CCDC116Q8IYX3 RNU6-778P-201ENST00000363269 103 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms