Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR4801-201ENST00000582704 82 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 RPL23AP78-201ENST00000599928 470 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 BNIP3P30-201ENST00000601184 574 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 U2.17-201ENST00000611454 95 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 FER-210ENST00000628534 558 ntTSL 5 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AC110079.1-202ENST00000635213 138 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AC009487.2-201ENST00000420969 6821 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AL592114.1-201ENST00000403842 483 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RNU6-193P-201ENST00000410977 107 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RNA5SP508-201ENST00000411327 119 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AL353621.1-201ENST00000418219 243 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AL358075.3-201ENST00000426289 226 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AL121890.1-201ENST00000435457 205 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AL354685.2-201ENST00000448218 1447 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RPS15AP27-201ENST00000449183 343 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AC006026.2-201ENST00000457376 180 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RNU7-180P-201ENST00000459240 63 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AC113155.1-201ENST00000511141 769 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RNU1-143P-201ENST00000516296 146 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 MIR892C-201ENST00000516410 77 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 SNORD19.2-201ENST00000516978 73 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AC245166.1-201ENST00000521012 253 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 BNIP3P6-201ENST00000549284 499 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 AC007151.1-201ENST00000572774 483 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 U1.23-201ENST00000610293 146 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 RNU1-68P-201ENST00000615382 146 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 U1.39-201ENST00000621562 146 ntBASIC3.23□□□□□ -1.89
HERC6Q8IVU3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HERC6Q8IVU3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 RNU6-1283P-201ENST00000365314 105 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 RNU6-877P-201ENST00000383868 107 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 RAP1BP3-201ENST00000407180 549 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 RPL32P35-201ENST00000415214 394 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AC087499.2-201ENST00000432861 149 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AC000111.3-201ENST00000433478 193 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 PRPS1P1-201ENST00000445305 876 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AL360271.2-201ENST00000447710 161 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AL441985.1-201ENST00000457727 251 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 RAC1P5-201ENST00000512182 576 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 MTND1P35-201ENST00000526739 508 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AK6P1-201ENST00000540219 478 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AC092325.1-201ENST00000566449 554 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AC012119.1-201ENST00000603184 222 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 MIR6134-201ENST00000617606 109 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AC022418.1-201ENST00000624118 445 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 GABRG2-229ENST00000641017 3628 ntBASIC3.22□□□□□ -1.89
HERC6Q8IVU3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
HERC6Q8IVU3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AC073325.2-201ENST00000339545 159 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 Y_RNA.248-201ENST00000364501 109 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 RNU4-66P-201ENST00000365199 138 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 MIR10A-201ENST00000385043 110 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 RNU6-750P-201ENST00000390946 107 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 SNORD115-47-201ENST00000391226 86 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 BTF3P7-201ENST00000407097 488 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 RBMX2P4-201ENST00000441256 376 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 FGF7P6-202ENST00000451282 293 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 TRBV12-1-201ENST00000479785 344 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 RN7SL283P-201ENST00000489055 303 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms