Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LYSMD2Q8IV50 AC007496.3-201ENST00000624987 3443 ntBASIC3.48□□□□□ -1.85
LYSMD2Q8IV50 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LYSMD2Q8IV50 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 SNORD56.1-201ENST00000362913 68 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 RNU6-1309P-201ENST00000363305 108 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 Y_RNA.133-201ENST00000363428 110 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 Y_RNA.149-201ENST00000363558 117 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 RNU4-42P-201ENST00000364738 142 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 SNORA69.1-201ENST00000390904 137 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 FTH1P15-201ENST00000406984 280 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 MIR1251-201ENST00000408552 70 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 SNORA57.3-201ENST00000411095 141 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AC245291.1-201ENST00000419501 328 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 SSXP4-201ENST00000451349 245 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AC109327.1-201ENST00000471666 403 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 Z98751.3-201ENST00000604447 521 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AC113403.1-201ENST00000604910 193 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AC100812.1-201ENST00000607622 580 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AC243829.7-201ENST00000633081 225 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 AC233263.6-201ENST00000631132 1963 ntBASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
LYSMD2Q8IV50 RAD17P1-201ENST00000418130 2042 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC032011.1-201ENST00000611703 1549 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC233981.2-201ENST00000611524 1614 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 Y_RNA.176-201ENST00000363815 109 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 RNU4-9P-201ENST00000364951 139 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 RNU6-198P-201ENST00000384258 104 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 RNU6-196P-201ENST00000384315 107 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 MIR628-201ENST00000385229 95 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 RNA5SP44-201ENST00000410446 133 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC005300.1-201ENST00000428401 373 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AL714022.1-201ENST00000439897 151 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AL161651.1-201ENST00000440882 223 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC079354.2-201ENST00000453523 154 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AL353752.1-201ENST00000454946 260 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC010099.1-201ENST00000455434 375 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC112492.4-201ENST00000456549 352 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 CEACAMP4-201ENST00000457676 421 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 TRBV12-2-201ENST00000489763 344 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 RNU6-581P-201ENST00000516214 105 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 RNU6-911P-201ENST00000516523 104 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 RNU6-1046P-201ENST00000516538 107 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 SNORD19.2-201ENST00000516978 73 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AP000867.2-201ENST00000532468 320 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC016256.1-201ENST00000547971 354 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC104581.2-201ENST00000572227 430 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC104695.3-201ENST00000604052 296 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AL132822.1-201ENST00000617063 513 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 7SK.10-201ENST00000621414 298 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC097372.5-201ENST00000623665 376 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 MIR4272-201ENST00000635924 64 ntBASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LYSMD2Q8IV50 AC091812.1-201ENST00000432235 1948 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 RNU6-283P-201ENST00000364788 107 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 RNU6-487P-201ENST00000365430 104 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 RNU6-843P-201ENST00000384454 104 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 RNA5SP390-201ENST00000410191 113 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 RNA5SP36-201ENST00000410197 133 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 RNA5SP38-201ENST00000410750 119 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 CYCSP32-201ENST00000440548 321 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 AC243964.1-201ENST00000441814 261 ntBASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.45□□□□□ -1.86
LYSMD2Q8IV50 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms