Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 SNORD114-30-201ENST00000364448 72 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 SNORA4.3-201ENST00000365564 137 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AL356776.1-201ENST00000406574 447 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 RPL36AP53-201ENST00000432891 316 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 CECR9-201ENST00000453421 199 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 RN7SL442P-201ENST00000473804 320 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AC022690.1-201ENST00000526681 550 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AL121579.1-201ENST00000555129 305 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 SNORD62.1-201ENST00000362541 86 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNA5SP295-201ENST00000362655 121 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNU4-20P-201ENST00000365601 151 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNU6-38P-201ENST00000384085 107 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 MIR514A2-201ENST00000385131 88 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 MIR514A3-201ENST00000385132 88 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RPLP0P7-201ENST00000416050 667 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNU6-333P-201ENST00000459117 107 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RN7SKP43-201ENST00000516173 320 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNU6-1038P-201ENST00000516516 104 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 MIR5583-1-201ENST00000580941 59 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 AC009570.1-201ENST00000609599 745 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 AC027309.3-201ENST00000623419 351 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
KRT28Q7Z3Y7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.59□□□□□ -1.84
KRT28Q7Z3Y7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-393P-201ENST00000384475 107 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 MIR27B-201ENST00000385129 97 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 SNORD70.1-201ENST00000391007 85 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AL592114.1-201ENST00000403842 483 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 RNU4-26P-201ENST00000410270 107 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AC138393.2-201ENST00000414742 246 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AC009161.1-201ENST00000417306 376 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 ARL5AP1-201ENST00000418991 388 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AL590639.1-201ENST00000456484 337 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 snoU13.23-201ENST00000458863 104 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AC098799.2-201ENST00000509466 868 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 LRRC34P2-201ENST00000514850 553 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 SNORA20.3-201ENST00000516880 132 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 RNA5SP165-201ENST00000517142 115 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 IGHV3-76-201ENST00000522465 295 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 CENPUP1-201ENST00000526649 1202 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 MIR4648-201ENST00000580107 72 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 MIR5692A1-201ENST00000580523 69 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-89P-201ENST00000606519 100 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AC002076.2-201ENST00000617362 122 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AC006504.8-201ENST00000621046 635 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 AL008636.1-201ENST00000625038 1018 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRT28Q7Z3Y7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-715P-201ENST00000365204 103 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 Y_RNA.373-201ENST00000365600 103 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-140P-201ENST00000384566 108 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 MIR518C-201ENST00000384822 101 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 AP000567.1-201ENST00000406413 156 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RNA5SP425-201ENST00000410336 112 ntBASIC3.57□□□□□ -1.84
KRT28Q7Z3Y7 RNU2-68P-201ENST00000410878 191 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms