Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC236972.1-201ENST00000433225 199 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 TPT1P12-201ENST00000448968 492 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AL031274.1-201ENST00000450334 232 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AC018437.1-201ENST00000492214 406 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 RNU1-103P-201ENST00000516502 125 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 TRMT10BP1-201ENST00000519377 943 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 OR8R1P-201ENST00000543943 764 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 MIR3171-201ENST00000584270 74 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AL160281.1-201ENST00000605307 311 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AL121917.1-203ENST00000605534 577 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AC004832.5-201ENST00000608677 401 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AC019193.3-201ENST00000609144 554 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AC133104.2-201ENST00000615272 193 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 MTND5P19-201ENST00000424872 1794 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 MTND4P27-201ENST00000450813 1354 ntBASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTCHD4Q6ZW05 AL513302.2-201ENST00000562313 1842 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 MTND5P10-201ENST00000603719 1809 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 RNU6-1059P-201ENST00000363752 98 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 Y_RNA.445-201ENST00000384168 102 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 MIR34A-201ENST00000385130 110 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 SNORD56-201ENST00000413522 71 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 Z82205.1-201ENST00000428456 297 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 SNORD5.1-201ENST00000458800 75 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 snoU109.2-201ENST00000459316 135 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 Y_RNA.631-201ENST00000459607 101 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AL133162.1-201ENST00000463228 453 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AC113155.1-201ENST00000511141 769 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 RNU6-928P-201ENST00000516876 104 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 RNU6-703P-201ENST00000516946 107 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 MIR2116-201ENST00000517221 80 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 DNAJC8P1-201ENST00000554535 372 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AC007224.1-201ENST00000564410 144 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 MIR4782-201ENST00000577987 79 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 MIR4286-201ENST00000580651 93 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 MIR5187-201ENST00000583479 76 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 BNIP3P22-201ENST00000593399 556 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 SNRPGP17-201ENST00000603780 214 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 AC138627.2-201ENST00000624202 601 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 U2.21-201ENST00000637295 81 ntBASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCHD4Q6ZW05 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC022336.2-201ENST00000568966 2538 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 Y_RNA.197-201ENST00000364004 102 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 Y_RNA.216-201ENST00000364205 93 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 RNU6-658P-201ENST00000384606 106 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 MIR559-201ENST00000385188 96 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 RPL21P17-201ENST00000397467 475 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 RN7SKP156-201ENST00000410308 342 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AL030996.1-201ENST00000411430 235 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC093578.1-201ENST00000415219 368 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 RPS29P7-201ENST00000439662 171 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 NOTCH2P1-201ENST00000443481 624 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 PCMTD1P1-201ENST00000455560 355 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 HMGN1P18-201ENST00000457642 277 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 MIR2053-201ENST00000459295 91 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 RPL23AP45-201ENST00000476406 468 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC096576.1-201ENST00000489014 359 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC097473.1-201ENST00000508142 408 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 TRAV32-201ENST00000553993 340 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 PARP1P2-201ENST00000556806 195 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 CYCSP39-201ENST00000565821 309 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC008121.1-201ENST00000603244 268 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 CYP2C61P-201ENST00000604072 290 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AL355598.1-201ENST00000604169 202 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AL161629.2-201ENST00000615347 275 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 AC092608.2-201ENST00000624427 218 ntBASIC3.22□□□□□ -1.89
PTCHD4Q6ZW05 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms