Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 MTND5P11-201ENST00000511037 1812 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 RNU6-657P-201ENST00000383904 107 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 MIR597-201ENST00000384968 97 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 RNA5SP100-201ENST00000410903 110 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 RNA5SP59-201ENST00000410922 110 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 MTND2P5-201ENST00000432656 1006 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AL441985.1-201ENST00000457727 251 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AL160314.1-201ENST00000490836 438 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AL133373.1-201ENST00000497098 94 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 MTCO3P42-201ENST00000509488 518 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 MTCO3P39-201ENST00000514812 518 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AC002545.1-201ENST00000592511 181 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AC017037.3-201ENST00000625016 472 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AC090517.3-201ENST00000625170 141 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AL590396.4-201ENST00000636779 956 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 U6.101-201ENST00000637707 76 ntBASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.85□□□□□ -2.27
CCDC171Q6TFL3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 RAC1P8-201ENST00000427086 527 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 MTND3P4-201ENST00000453537 303 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AC013828.1-201ENST00000481845 158 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AC117454.1-201ENST00000491120 168 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 RNA5SP135-201ENST00000517019 125 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AL121821.2-201ENST00000556081 394 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AC002400.1-201ENST00000569310 726 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AL158211.4-201ENST00000606988 584 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AC079416.3-201ENST00000624479 549 ntBASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.84□□□□□ -2.28
CCDC171Q6TFL3 AL391516.1-201ENST00000554380 2449 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 RNU1-58P-201ENST00000362413 163 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 SNORD115-48-201ENST00000364764 76 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 RNU1-39P-201ENST00000383897 165 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 RNU6-26P-201ENST00000383985 107 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 SNORA48.1-201ENST00000390879 135 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 RNU1-139P-201ENST00000391307 165 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 RPL22P22-201ENST00000395439 379 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 RNU2-28P-201ENST00000410457 189 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 VN1R10P-201ENST00000447106 875 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 CECR9-201ENST00000453421 199 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 TPRKBP1-201ENST00000456243 481 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 Y_RNA.670-201ENST00000516255 105 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 COPS8P3-201ENST00000526024 482 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 AP006587.4-201ENST00000526053 529 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 MTCO2P15-201ENST00000532655 656 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 BNIP3P24-201ENST00000593398 557 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 AL355802.4-201ENST00000607635 548 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 AL118556.2-201ENST00000614375 824 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 AC009541.1-201ENST00000438279 2662 ntBASIC0.83□□□□□ -2.28
CCDC171Q6TFL3 AL442644.1-201ENST00000454390 3105 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 SNORD14D-201ENST00000384390 87 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 AL606490.4-201ENST00000423117 127 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 CR848007.2-201ENST00000424918 787 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 RPS27P16-201ENST00000425758 201 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 RPL9P9-202ENST00000466501 579 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 RNA5SP480-201ENST00000516840 109 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 RNA5SP290-201ENST00000517133 127 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 RNU6-840P-201ENST00000517275 65 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 ADAM3B-201ENST00000569937 840 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 NDUFA8P1-201ENST00000605525 367 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 AP001033.2-201ENST00000609701 1003 ntBASIC0.82□□□□□ -2.28
CCDC171Q6TFL3 MIR1262-201ENST00000408276 93 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 AL451054.2-201ENST00000420896 202 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 USP9YP26-201ENST00000421008 661 ntBASIC0.81□□□□□ -2.28
CCDC171Q6TFL3 USP9YP18-201ENST00000425912 695 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms