Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC004584.2-201ENST00000570407 410 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 RPS29P30-201ENST00000600975 111 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 MIR3976-201ENST00000606807 139 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 AC127459.3-201ENST00000624328 466 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 AL450472.1-202ENST00000637286 180 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 ZNF962P-201ENST00000443465 3140 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 MIR335-201ENST00000362173 94 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.65-201ENST00000362846 100 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-173P-201ENST00000364215 104 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.533-201ENST00000384596 114 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 MIR607-201ENST00000385241 96 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-882P-201ENST00000391025 103 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 SAR1AP2-201ENST00000392696 594 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AL603910.2-201ENST00000407268 136 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 CYCSP33-201ENST00000414485 327 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 SSXP9-201ENST00000417503 292 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 RPL21P66-201ENST00000426566 466 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AL606753.1-201ENST00000427435 87 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 CYCSP32-201ENST00000440548 321 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 snoU13.4-201ENST00000458916 104 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 RPL37P6-201ENST00000460682 294 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 RN7SL601P-201ENST00000471221 293 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 VWA8P1-201ENST00000510889 176 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 ACA59.1-201ENST00000515966 143 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 SNORA31.3-201ENST00000516029 96 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 IGKV2-38-201ENST00000517443 247 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 TRAV32-201ENST00000553993 340 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC011471.1-201ENST00000585766 187 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 OR1M4P-201ENST00000589199 287 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AL355877.2-201ENST00000603670 358 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AL450472.3-201ENST00000615578 367 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AC004825.2-201ENST00000616634 455 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 AP000560.1-201ENST00000624150 1937 ntBASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CNKSR3Q6P9H4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 snoU2_19.2-201ENST00000363024 80 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 RNA5SP50-201ENST00000363731 107 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.464-201ENST00000384282 110 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 MIR634-201ENST00000385208 97 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 AL139156.1-201ENST00000412785 841 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 BX842559.1-201ENST00000419615 532 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 CYCSP4-201ENST00000429682 331 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 SNRPGP5-201ENST00000456003 220 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 RPL31P13-201ENST00000484151 370 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 FAM60BP-201ENST00000578364 658 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 MIR5701-3-201ENST00000578890 82 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 CPDP1-201ENST00000579660 283 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 LRRC37A5P-203ENST00000580181 585 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 MIR5701-1-201ENST00000585138 82 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 MIR5701-2-201ENST00000615634 82 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 SNORD39.4-201ENST00000620099 78 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 AL353748.2-201ENST00000622148 471 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 MIR3651-201ENST00000630427 90 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.09□□□□□ -1.75
CNKSR3Q6P9H4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CNKSR3Q6P9H4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CNKSR3Q6P9H4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CNKSR3Q6P9H4 AL391987.6-201ENST00000305671 199 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 SNORA31-201ENST00000362607 130 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-1159P-201ENST00000362933 107 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.269-201ENST00000364685 89 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.291-201ENST00000364886 113 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-125P-201ENST00000384505 107 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-817P-201ENST00000391083 104 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-607P-201ENST00000411283 108 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC079780.1-201ENST00000428259 207 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC092423.1-201ENST00000430165 186 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC090774.1-201ENST00000435925 246 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC004866.2-201ENST00000438285 481 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 BX510359.1-201ENST00000456973 237 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 GMPSP1-201ENST00000514075 579 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-911P-201ENST00000516523 104 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 RN7SKP258-201ENST00000517151 304 ntBASIC4.08□□□□□ -1.76
CNKSR3Q6P9H4 AC007458.1-201ENST00000542812 373 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms