Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 MIR3921-201ENST00000577308 85 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 RAC1P9-201ENST00000604990 392 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AL591424.2-201ENST00000617023 128 ntBASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRPF40BQ6NWY9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-472P-201ENST00000384299 107 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 MIR1290-201ENST00000408735 78 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 RPS24P6-201ENST00000452670 400 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-1132P-201ENST00000459214 107 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 OR5D17P-201ENST00000531492 978 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AC023157.2-201ENST00000540596 141 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AC007458.1-201ENST00000542812 373 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AMZ2P1-203ENST00000565833 850 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 RNU1-30P-201ENST00000606575 163 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 AP002826.1-201ENST00000608835 315 ntBASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PRPF40BQ6NWY9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 MTND5P9-201ENST00000503854 1755 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 Y_RNA.222-201ENST00000364264 102 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 RNU6-384P-201ENST00000364900 104 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 MIR10A-201ENST00000385043 110 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 MIR199A2-201ENST00000385289 110 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 SNORA69.1-201ENST00000390904 137 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 SNORD56-201ENST00000413522 71 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 AL592148.1-201ENST00000413568 445 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 EIF4EP2-201ENST00000422816 654 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 VWA8P1-201ENST00000510889 176 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 RNA5SP291-201ENST00000517222 105 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 AC008121.1-201ENST00000603244 268 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 AC010615.1-201ENST00000594254 1764 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 LINC02471-203ENST00000641941 4752 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 AL049781.1-201ENST00000623195 3585 ntBASIC4.73□□□□□ -1.65
PRPF40BQ6NWY9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 Y_RNA.214-201ENST00000364201 112 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 SNORD14B-201ENST00000364533 90 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 Y_RNA.623-201ENST00000411128 95 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 ELOCP20-201ENST00000422460 345 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 HMGB1P37-201ENST00000439613 609 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 FABP5P15-201ENST00000453566 214 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 HMGB1P22-201ENST00000505315 124 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 AK3P2-201ENST00000507976 429 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 HMGB1P14-201ENST00000557424 591 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 AC090517.1-201ENST00000569307 266 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 AC130454.1-201ENST00000622948 401 ntBASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF40BQ6NWY9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
PRPF40BQ6NWY9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
PRPF40BQ6NWY9 AC018555.1-201ENST00000567548 1980 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 AC007685.1-201ENST00000329806 452 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.483-201ENST00000384380 101 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 MIR34A-201ENST00000385130 110 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 RPL27AP8-201ENST00000424277 446 ntBASIC4.71□□□□□ -1.66
PRPF40BQ6NWY9 AL590383.1-201ENST00000428602 75 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms