Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.15□□□□□ -2.39
RIF1Q5UIP0 Y_RNA.78-201ENST00000362970 110 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 Y_RNA.86-201ENST00000363020 111 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AL512844.2-201ENST00000433990 593 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 RPS15AP5-201ENST00000436276 388 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 HSPE1P13-201ENST00000451143 297 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 SCARNA21.1-201ENST00000515996 128 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC136628.3-201ENST00000521868 290 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 MIR4441-201ENST00000582623 100 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC021171.1-201ENST00000603137 706 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC110792.4-201ENST00000609843 298 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC099842.1-201ENST00000619919 596 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 MTND4P14-201ENST00000435799 1354 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 Z75746.1-201ENST00000440243 2080 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 SNORD114-28-201ENST00000363610 72 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 RNU6-160P-201ENST00000384591 107 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 MTCYBP34-201ENST00000439552 670 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 SNRPGP6-201ENST00000451124 220 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AP003122.4-201ENST00000530980 758 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.14□□□□□ -2.39
RIF1Q5UIP0 BNIP3P25-201ENST00000596023 559 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC040174.2-201ENST00000602701 465 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC027309.3-201ENST00000623419 351 ntBASIC0.14□□□□□ -2.39
RIF1Q5UIP0 AC016716.1-201ENST00000265882 708 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 SNORD114-31-201ENST00000363219 75 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 U3.20-201ENST00000390909 217 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 PIGFP2-201ENST00000421400 651 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC096920.1-201ENST00000423991 241 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 OR51AB1P-201ENST00000429046 620 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 GTF2IP13-201ENST00000438487 386 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 ARPC3P5-201ENST00000448802 534 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC099513.1-201ENST00000490423 301 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 SCARNA8-201ENST00000515924 131 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 MRPS36P4-201ENST00000534436 298 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC073349.3-201ENST00000617616 186 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AL512506.2-201ENST00000624472 458 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC023141.4-201ENST00000412031 328 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 RPL21P47-201ENST00000483696 477 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AF213884.2-201ENST00000510417 903 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 PSMC1P5-201ENST00000512850 177 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 MED28P6-201ENST00000558776 231 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC113194.1-201ENST00000606037 500 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 AC019131.2-201ENST00000609071 870 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 MTND5P17-201ENST00000418405 1603 ntBASIC0.13□□□□□ -2.39
RIF1Q5UIP0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 MIR10B-201ENST00000385011 110 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 MTCYBP24-201ENST00000420387 1106 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 MICF-203ENST00000432679 129 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 SNORA31.8-201ENST00000516327 108 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 RNU6-158P-201ENST00000517104 100 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 MTND2P17-201ENST00000550281 688 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC092354.1-201ENST00000606057 376 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 SNORD114-16-201ENST00000363044 70 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 RNU6-10P-201ENST00000384036 107 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 Y_RNA.505-201ENST00000384489 102 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 RNU6-15P-201ENST00000384534 107 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 USP9YP21-201ENST00000420603 432 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC015908.1-201ENST00000478739 476 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 HMGB1P36-201ENST00000487709 576 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC073544.2-201ENST00000601155 540 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC025449.1-201ENST00000603896 529 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC121334.2-201ENST00000605387 271 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 RNU4-5P-201ENST00000607255 135 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC025588.4-201ENST00000615802 908 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 AC139769.3-201ENST00000618383 175 ntBASIC0.12□□□□□ -2.39
RIF1Q5UIP0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms