Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR539-201ENST00000365690 78 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNU6-211P-201ENST00000384047 107 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNU6-76P-201ENST00000384060 104 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNU6-20P-201ENST00000384106 107 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNU6-239P-201ENST00000390990 99 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNA5SP213-201ENST00000391031 106 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNU2-2P-201ENST00000410396 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AL158156.1-201ENST00000422509 473 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 GOT2P5-201ENST00000433995 546 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AC087588.1-201ENST00000462203 316 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 SNORA40.9-201ENST00000515895 93 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 KLKP1-201ENST00000595979 403 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AL670379.2-201ENST00000604983 252 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNU2-4P-201ENST00000606190 192 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AC107294.1-201ENST00000609524 467 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.15-201ENST00000611544 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.16-201ENST00000613119 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.12-201ENST00000613778 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.9-201ENST00000615427 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.11-201ENST00000616345 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.2-201ENST00000616535 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.3-201ENST00000617785 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.19-201ENST00000618602 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 RNU2-1-201ENST00000618664 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.6-201ENST00000619225 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.5-201ENST00000619465 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 U2.10-201ENST00000620268 191 ntBASIC5.38□□□□□ -1.55
RC3H1Q5TC82 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.38□□□□□ -1.55
RC3H1Q5TC82 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 Y_RNA.230-201ENST00000364348 109 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 RNU6-1175P-201ENST00000365200 107 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 RNU6-1056P-201ENST00000383996 107 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 RNU1-139P-201ENST00000391307 165 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 CRYBB2P1-203ENST00000415709 538 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 PTGES3P4-201ENST00000426243 356 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 RNU6-1211P-201ENST00000459179 105 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 RNU6-567P-201ENST00000516746 107 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 RNA5SP471-201ENST00000516971 106 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AC006064.5-201ENST00000541782 248 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AL160290.3-201ENST00000604869 165 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AC008873.1-201ENST00000625051 138 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 SCARNA4-201ENST00000629045 128 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 snoU18.1-201ENST00000629629 71 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 AL079305.1-201ENST00000623159 3008 ntBASIC5.37□□□□□ -1.55
RC3H1Q5TC82 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.37□□□□□ -1.55
RC3H1Q5TC82 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 RNA5SP361-201ENST00000362686 118 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 Y_RNA.121-201ENST00000363309 113 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 SNORD46.1-201ENST00000364139 104 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 SNORD14B-201ENST00000364533 90 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 RPL30P13-201ENST00000418873 348 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 WARS2P1-201ENST00000429678 537 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 RPL23AP75-201ENST00000491601 451 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 RNA5SP360-201ENST00000516555 118 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 RNU7-121P-201ENST00000516604 62 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 MIR4679-2-201ENST00000578358 77 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 SNORA51-201ENST00000606420 132 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 RMST_6.1-201ENST00000611980 203 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 AL360181.4-201ENST00000621752 134 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RC3H1Q5TC82 AC016588.2-201ENST00000632484 3021 ntBASIC5.36□□□□□ -1.55
RC3H1Q5TC82 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RC3H1Q5TC82 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RC3H1Q5TC82 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RC3H1Q5TC82 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms