Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AP006289.1-201ENST00000538089 277 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC006199.1-201ENST00000548728 219 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RNFT1Q5M7Z0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC079741.1-201ENST00000321498 212 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 Y_RNA.114-201ENST00000363265 113 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 Y_RNA.120-201ENST00000363304 110 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-1082P-201ENST00000364574 107 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-1131P-201ENST00000364955 107 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 MT-TT-201ENST00000387460 66 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 U3.32-201ENST00000408116 212 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 RNA5SP475-201ENST00000410568 110 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 RN7SKP100-201ENST00000411258 284 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 COX6CP13-201ENST00000428703 226 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AL450023.3-201ENST00000440592 271 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AURKAPS2-201ENST00000454983 333 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AP001880.2-201ENST00000538233 448 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AL161713.1-201ENST00000555538 145 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC209154.1-201ENST00000582156 337 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC099669.2-201ENST00000616549 437 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 AC138915.1-201ENST00000565427 1685 ntBASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
RNFT1Q5M7Z0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 Y_RNA.229-201ENST00000364347 113 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-49P-201ENST00000384256 107 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 MIR514A1-201ENST00000385133 98 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AL512633.1-201ENST00000399931 655 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 RPS16P5-201ENST00000406501 404 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 Y_RNA.617-201ENST00000410920 90 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 GPS2P1-201ENST00000411761 986 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AC016397.1-201ENST00000412463 242 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 YPEL5P1-201ENST00000419731 367 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AC091390.3-201ENST00000426478 338 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 RPL23AP70-201ENST00000483361 460 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 RN7SL441P-201ENST00000492388 296 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AC062037.1-201ENST00000605302 128 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AP001318.4-201ENST00000616637 121 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 AL359693.1-201ENST00000614959 2407 ntBASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.47□□□□□ -1.69
RNFT1Q5M7Z0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms