Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 RNU4-76P-201ENST00000364509 141 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 Y_RNA.373-201ENST00000365600 103 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 RNU6-831P-201ENST00000384548 107 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 Y_RNA.535-201ENST00000384612 99 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL122016.1-201ENST00000403365 367 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 BTF3L4P3-201ENST00000418879 476 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL365400.1-201ENST00000431854 640 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 UBBP3-201ENST00000445497 241 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 RPL27AP5-201ENST00000469428 449 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 RNU4-49P-201ENST00000516080 140 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC105029.1-201ENST00000520250 669 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 RPL7P20-201ENST00000520308 745 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 HMGN2P15-201ENST00000585707 270 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC010620.2-201ENST00000600135 313 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC007179.3-201ENST00000604976 235 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 MTND4LP5-201ENST00000605152 292 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC092807.2-201ENST00000609367 243 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL132765.2-201ENST00000610812 351 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC093913.1-201ENST00000614178 329 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 MIR3651-201ENST00000630427 90 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNAI3Q3KNW1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNAI3Q3KNW1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 AC008669.1-201ENST00000565823 2178 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 RNU6-82P-201ENST00000363970 107 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 RNU6-817P-201ENST00000391083 104 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL592114.1-201ENST00000403842 483 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL139397.2-201ENST00000404529 772 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AC092809.3-201ENST00000415453 231 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL513477.1-202ENST00000417061 214 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 CYCSP32-201ENST00000440548 321 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 RPL39P40-201ENST00000445481 146 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 MRPL50P4-201ENST00000446432 475 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 FABP5P13-201ENST00000452144 328 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 RPL12P25-201ENST00000455592 494 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 SCARNA18-201ENST00000459004 134 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 RPL21P93-201ENST00000480465 489 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 SUMO2P6-201ENST00000505273 288 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AC103851.1-201ENST00000506833 274 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 RNU6-677P-201ENST00000516914 101 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNAI3Q3KNW1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 OR11H5P-201ENST00000554039 926 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 SCOCP1-201ENST00000554676 349 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL391261.3-201ENST00000557194 520 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 MIR4742-201ENST00000581069 85 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 RPL23AP78-201ENST00000599928 470 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL670379.4-201ENST00000605279 254 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL121757.2-201ENST00000611223 313 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AC096577.2-201ENST00000611455 153 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 uc_338.5-201ENST00000611839 155 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 AL359547.2-201ENST00000615810 418 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 TPTEP1-208ENST00000636884 213 ntBASIC2.53□□□□□ -2
SNAI3Q3KNW1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.53□□□□□ -2
SNAI3Q3KNW1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.53□□□□□ -2.01
SNAI3Q3KNW1 AC022336.2-201ENST00000568966 2538 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 MIR422A-201ENST00000362286 90 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RNU1-35P-201ENST00000362782 153 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 SNORD46.1-201ENST00000364139 104 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 SNORA9.2-201ENST00000365361 133 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RNU6-116P-201ENST00000384042 109 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RNU6-190P-201ENST00000384154 102 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 RPS12P24-201ENST00000412619 387 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AL451074.5-201ENST00000415894 435 ntBASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.52□□□□□ -2.01
SNAI3Q3KNW1 PRPS1P1-201ENST00000445305 876 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms