Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 SNORA4.4-201ENST00000515921 135 ntBASIC0.71□□□□□ -2.3
HMGXB3Q12766 LSM6P2-201ENST00000552208 177 ntBASIC0.71□□□□□ -2.3
HMGXB3Q12766 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGXB3Q12766 AL022067.1-201ENST00000602426 454 ntBASIC0.71□□□□□ -2.3
HMGXB3Q12766 AC009974.1-201ENST00000608881 455 ntBASIC0.71□□□□□ -2.3
HMGXB3Q12766 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGXB3Q12766 AP005212.4-201ENST00000614206 710 ntBASIC0.71□□□□□ -2.3
HMGXB3Q12766 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HMGXB3Q12766 RNU6-251P-201ENST00000363235 104 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 MIR561-201ENST00000385216 97 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGXB3Q12766 AL160275.3-201ENST00000423876 471 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGXB3Q12766 AC092685.1-201ENST00000447960 1243 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 ARPC3P5-201ENST00000448802 534 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 AC112492.4-201ENST00000456549 352 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 MTCYBP16-201ENST00000509187 1129 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.7□□□□□ -2.3
HMGXB3Q12766 AC034114.1-201ENST00000520293 285 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.7□□□□□ -2.3
HMGXB3Q12766 OR5AK1P-201ENST00000524837 922 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 AL356432.3-201ENST00000568952 465 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 HMGN1P30-201ENST00000589286 268 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 MTRNR2L2-201ENST00000604882 87 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGXB3Q12766 AC024581.2-201ENST00000619986 252 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 U1.36-201ENST00000620684 176 ntBASIC0.7□□□□□ -2.3
HMGXB3Q12766 RNU5A-1-201ENST00000362698 116 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 RNU6-486P-201ENST00000363116 107 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 RNU6-39P-201ENST00000384344 107 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 AC010099.3-201ENST00000423896 409 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 AC124947.2-202ENST00000552735 133 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 SUMO2P14-201ENST00000604488 293 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 AC073569.3-201ENST00000619055 682 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 RNU6-1222P-201ENST00000384615 107 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 AC009310.1-201ENST00000414414 451 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 RAB11AP1-201ENST00000442978 646 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 CYP2C59P-201ENST00000457790 269 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 AL391813.1-201ENST00000603098 260 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 AC017104.5-201ENST00000637647 639 ntBASIC0.69□□□□□ -2.3
HMGXB3Q12766 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.69□□□□□ -2.3
HMGXB3Q12766 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.68□□□□□ -2.3
HMGXB3Q12766 AL359854.1-201ENST00000614203 1594 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 SNORD51-201ENST00000384320 80 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 AL512637.2-201ENST00000431287 1256 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGXB3Q12766 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGXB3Q12766 CR769776.1-201ENST00000441254 787 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.68□□□□□ -2.3
HMGXB3Q12766 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.68□□□□□ -2.3
HMGXB3Q12766 AC091435.1-201ENST00000505442 584 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 AC093677.1-201ENST00000514414 678 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 RNU6-322P-201ENST00000516010 103 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 IGLVI-20-201ENST00000519296 130 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
HMGXB3Q12766 AC136932.1-201ENST00000574771 208 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 AC009233.1-201ENST00000616477 371 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 MIR6130-201ENST00000619419 109 ntBASIC0.68□□□□□ -2.3
HMGXB3Q12766 Y_RNA.457-201ENST00000384237 111 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 BEND7P1-201ENST00000422058 457 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 UBE2V1P4-201ENST00000425374 344 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 AC092634.2-201ENST00000428146 1010 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 RPL26P6-201ENST00000440913 438 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 PRPS1P1-201ENST00000445305 876 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 LARP1BP2-201ENST00000486594 519 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGXB3Q12766 DUXAP1-201ENST00000556632 463 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 AC019288.1-201ENST00000557918 224 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGXB3Q12766 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 AC024060.1-201ENST00000607052 494 ntBASIC0.67□□□□□ -2.3
HMGXB3Q12766 MIR888-201ENST00000401186 77 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 AL139098.1-201ENST00000407291 389 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 RNU2-43P-201ENST00000410306 190 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 BTF3P8-201ENST00000414577 526 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 RPS25P9-201ENST00000435591 252 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 Z82210.1-201ENST00000440037 231 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 AL161788.1-201ENST00000441805 169 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 AC068135.1-201ENST00000446164 246 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGXB3Q12766 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HMGXB3Q12766 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGXB3Q12766 RNU6-902P-201ENST00000517212 91 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 HSPA8P13-201ENST00000523715 472 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 AC005668.1-201ENST00000571142 476 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 NIFKP6-201ENST00000598115 845 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 FTX_3.1-201ENST00000610451 147 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 MIR8074-201ENST00000615081 81 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 AC009318.4-201ENST00000620496 486 ntBASIC0.66□□□□□ -2.3
HMGXB3Q12766 AL121890.5-201ENST00000620848 304 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms