Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.04□□□□□ -1.92
LTBQ06643 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LTBQ06643 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
LTBQ06643 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LTBQ06643 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.04□□□□□ -1.92
LTBQ06643 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LTBQ06643 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.03□□□□□ -1.92
LTBQ06643 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LTBQ06643 MTND5P19-201ENST00000424872 1794 ntBASIC3.03□□□□□ -1.92
LTBQ06643 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LTBQ06643 FTLP6-201ENST00000355274 422 ntBASIC3.03□□□□□ -1.92
LTBQ06643 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
LTBQ06643 RNU6-371P-201ENST00000364283 108 ntBASIC3.03□□□□□ -1.92
LTBQ06643 Y_RNA.422-201ENST00000384054 114 ntBASIC3.03□□□□□ -1.92
LTBQ06643 RNU6-310P-201ENST00000384655 107 ntBASIC3.03□□□□□ -1.92
LTBQ06643 Y_RNA.646-201ENST00000410980 101 ntBASIC3.03□□□□□ -1.92
LTBQ06643 RPL7P10-201ENST00000417407 739 ntBASIC3.03□□□□□ -1.92
LTBQ06643 RPL21P66-201ENST00000426566 466 ntBASIC3.03□□□□□ -1.92
LTBQ06643 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.03□□□□□ -1.92
LTBQ06643 RPL23AP62-201ENST00000463396 453 ntBASIC3.03□□□□□ -1.92
LTBQ06643 AC010285.1-201ENST00000470580 392 ntBASIC3.03□□□□□ -1.92
LTBQ06643 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
LTBQ06643 AC079140.5-201ENST00000507882 310 ntBASIC3.03□□□□□ -1.92
LTBQ06643 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.03□□□□□ -1.92
LTBQ06643 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.03□□□□□ -1.92
LTBQ06643 ERHP1-201ENST00000523006 310 ntBASIC3.03□□□□□ -1.92
LTBQ06643 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.03□□□□□ -1.92
LTBQ06643 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.03□□□□□ -1.92
LTBQ06643 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.03□□□□□ -1.92
LTBQ06643 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.03□□□□□ -1.92
LTBQ06643 AC098657.3-201ENST00000620434 263 ntBASIC3.03□□□□□ -1.92
LTBQ06643 AC022418.1-201ENST00000624118 445 ntBASIC3.03□□□□□ -1.92
LTBQ06643 MIR4275-201ENST00000636486 87 ntBASIC3.03□□□□□ -1.92
LTBQ06643 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LTBQ06643 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LTBQ06643 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.03□□□□□ -1.92
LTBQ06643 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
LTBQ06643 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LTBQ06643 AC017071.1-201ENST00000564407 2204 ntBASIC3.03□□□□□ -1.93
LTBQ06643 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LTBQ06643 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LTBQ06643 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LTBQ06643 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.02□□□□□ -1.93
LTBQ06643 Y_RNA.473-201ENST00000384333 102 ntBASIC3.02□□□□□ -1.93
LTBQ06643 RNU6-45P-201ENST00000384471 107 ntBASIC3.02□□□□□ -1.93
LTBQ06643 RNU6-817P-201ENST00000391083 104 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
LTBQ06643 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
LTBQ06643 RNA5SP293-201ENST00000410527 113 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.02□□□□□ -1.93
LTBQ06643 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.02□□□□□ -1.93
LTBQ06643 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.02□□□□□ -1.93
LTBQ06643 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.02□□□□□ -1.93
LTBQ06643 AC125238.1-201ENST00000448842 249 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.02□□□□□ -1.93
LTBQ06643 RNU6-953P-201ENST00000459154 107 ntBASIC3.02□□□□□ -1.93
LTBQ06643 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AC104136.1-201ENST00000512969 394 ntBASIC3.02□□□□□ -1.93
LTBQ06643 SMURF2P1-201ENST00000514992 481 ntBASIC3.02□□□□□ -1.93
LTBQ06643 SNORA64.4-201ENST00000516632 81 ntBASIC3.02□□□□□ -1.93
LTBQ06643 RNU6-914P-201ENST00000516749 109 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AC022634.1-201ENST00000520765 532 ntBASIC3.02□□□□□ -1.93
LTBQ06643 RNU6-323P-201ENST00000521915 107 ntBASIC3.02□□□□□ -1.93
LTBQ06643 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.02□□□□□ -1.93
LTBQ06643 SNRPGP18-201ENST00000553000 214 ntBASIC3.02□□□□□ -1.93
LTBQ06643 DNAJC8P1-201ENST00000554535 372 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.02□□□□□ -1.93
LTBQ06643 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.02□□□□□ -1.93
LTBQ06643 AC073539.2-201ENST00000597113 165 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AC008737.2-201ENST00000599446 118 ntBASIC3.02□□□□□ -1.93
LTBQ06643 CYP2C61P-201ENST00000604072 290 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AC002044.1-201ENST00000606707 158 ntBASIC3.02□□□□□ -1.93
LTBQ06643 MIR7106-201ENST00000612419 65 ntBASIC3.02□□□□□ -1.93
LTBQ06643 MIR6128-201ENST00000615528 109 ntBASIC3.02□□□□□ -1.93
LTBQ06643 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.02□□□□□ -1.93
LTBQ06643 AL669831.3-213ENST00000636676 183 ntBASIC3.02□□□□□ -1.93
LTBQ06643 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LTBQ06643 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LTBQ06643 AC002546.1-201ENST00000588041 2504 ntBASIC3.01□□□□□ -1.93
LTBQ06643 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LTBQ06643 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.01□□□□□ -1.93
LTBQ06643 AL035425.3-201ENST00000564206 4996 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
LTBQ06643 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LTBQ06643 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
LTBQ06643 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LTBQ06643 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LTBQ06643 AC138393.1-203ENST00000327086 343 ntBASIC3.01□□□□□ -1.93
LTBQ06643 Y_RNA.28-201ENST00000362554 111 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RNU1-70P-201ENST00000362618 164 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RNA5SP383-201ENST00000362934 120 ntBASIC3.01□□□□□ -1.93
LTBQ06643 ATG3P1-201ENST00000419507 911 ntBASIC3.01□□□□□ -1.93
LTBQ06643 OOSP1P1-201ENST00000423265 274 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RPL23AP69-201ENST00000431134 458 ntBASIC3.01□□□□□ -1.93
LTBQ06643 SNAP23P1-201ENST00000433229 246 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AC006028.1-201ENST00000438379 402 ntBASIC3.01□□□□□ -1.93
LTBQ06643 HMGN2P16-201ENST00000456802 261 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AL136097.1-201ENST00000456945 913 ntBASIC3.01□□□□□ -1.93
LTBQ06643 MIR2053-201ENST00000459295 91 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms