Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RNU6-581P-201ENST00000516214 105 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 RNU1-107P-201ENST00000516617 154 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 AC068657.1-201ENST00000520807 306 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3AQ05086 AC007151.1-201ENST00000572774 483 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 MIR5583-1-201ENST00000580941 59 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.16□□□□□ -1.9
UBE3AQ05086 YWHAEP7-203ENST00000622054 312 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.16□□□□□ -1.9
UBE3AQ05086 MIR1321-201ENST00000637766 79 ntBASIC3.16□□□□□ -1.9
UBE3AQ05086 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBE3AQ05086 AC092435.3-201ENST00000565538 3654 ntBASIC3.15□□□□□ -1.9
UBE3AQ05086 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
UBE3AQ05086 RNU6-1280P-201ENST00000365211 107 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 SNORA9.2-201ENST00000365361 133 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 MIR518D-201ENST00000385014 87 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 SNORA16.2-201ENST00000390991 127 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 RNU6-648P-201ENST00000410190 107 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 Y_RNA.619-201ENST00000410951 90 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 RNU6-607P-201ENST00000411283 108 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 FCF1P9-201ENST00000412546 282 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 ATG3P1-201ENST00000419507 911 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 MTCO1P20-201ENST00000425366 358 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC087499.2-201ENST00000432861 149 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 PRPS1P1-201ENST00000445305 876 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE3AQ05086 AC011005.2-201ENST00000487324 359 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE3AQ05086 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 RNU2-69P-201ENST00000516061 100 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC109635.3-201ENST00000529536 185 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
UBE3AQ05086 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.15□□□□□ -1.91
UBE3AQ05086 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.15□□□□□ -1.91
UBE3AQ05086 LRRC37A5P-203ENST00000580181 585 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 MIR4435-1-201ENST00000582552 80 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC005261.5-201ENST00000596280 355 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC024153.1-201ENST00000603103 365 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 RMST_4.1-201ENST00000616886 107 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC022418.1-201ENST00000624118 445 ntBASIC3.15□□□□□ -1.91
UBE3AQ05086 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE3AQ05086 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.15□□□□□ -1.91
UBE3AQ05086 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBE3AQ05086 RNU4-82P-201ENST00000362443 140 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 RNU6-1090P-201ENST00000364065 94 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 RNU6-384P-201ENST00000364900 104 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 AL592114.1-201ENST00000403842 483 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 CIR1P3-201ENST00000405137 479 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.14□□□□□ -1.91
UBE3AQ05086 AC016831.2-201ENST00000417179 352 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 PGBD4P6-201ENST00000421501 610 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.14□□□□□ -1.91
UBE3AQ05086 MTND1P4-201ENST00000435196 415 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 RPL23AP58-201ENST00000440453 469 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.14□□□□□ -1.91
UBE3AQ05086 RPL23AP11-201ENST00000475260 469 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 RPL31P41-201ENST00000477967 372 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.14□□□□□ -1.91
UBE3AQ05086 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.14□□□□□ -1.91
UBE3AQ05086 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
UBE3AQ05086 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.14□□□□□ -1.91
UBE3AQ05086 AL031601.2-202ENST00000622650 282 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 AP003400.5-201ENST00000624827 617 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
UBE3AQ05086 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UBE3AQ05086 ZNF519P1-201ENST00000449011 1626 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 AC009487.2-201ENST00000420969 6821 ntBASIC3.14□□□□□ -1.91
UBE3AQ05086 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBE3AQ05086 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBE3AQ05086 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.13□□□□□ -1.91
UBE3AQ05086 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3AQ05086 RNU4-66P-201ENST00000365199 138 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 Y_RNA.450-201ENST00000384198 113 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 U3.37-201ENST00000408528 213 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 MIR548F1-201ENST00000408667 84 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3AQ05086 RNU2-3P-201ENST00000410144 191 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.13□□□□□ -1.91
UBE3AQ05086 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3AQ05086 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.13□□□□□ -1.91
UBE3AQ05086 RPL7P37-201ENST00000425095 738 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 USP9YP18-201ENST00000425912 695 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3AQ05086 RPS12P18-201ENST00000442381 270 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC009296.1-201ENST00000443146 155 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3AQ05086 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3AQ05086 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.13□□□□□ -1.91
UBE3AQ05086 snoU109.2-201ENST00000459316 135 ntBASIC3.13□□□□□ -1.91
UBE3AQ05086 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.13□□□□□ -1.91
UBE3AQ05086 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms