Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC234778.2-201ENST00000566241 354 ntBASIC2.72□□□□□ -1.97
CDK3Q00526 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.72□□□□□ -1.97
CDK3Q00526 MIR5583-1-201ENST00000580941 59 ntBASIC2.72□□□□□ -1.97
CDK3Q00526 AC122108.2-201ENST00000611946 526 ntBASIC2.72□□□□□ -1.97
CDK3Q00526 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CDK3Q00526 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.72□□□□□ -1.97
CDK3Q00526 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.72□□□□□ -1.97
CDK3Q00526 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.72□□□□□ -1.97
CDK3Q00526 AC027514.1-201ENST00000588561 1603 ntBASIC2.71□□□□□ -1.97
CDK3Q00526 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDK3Q00526 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDK3Q00526 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.71□□□□□ -1.98
CDK3Q00526 RPL9P7-201ENST00000330965 580 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 RNU6-384P-201ENST00000364900 104 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 RNU6-1280P-201ENST00000365211 107 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 RNU6-434P-201ENST00000384376 107 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 MIR518D-201ENST00000385014 87 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 MIR34A-201ENST00000385130 110 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 RNA5SP184-201ENST00000411071 108 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC016831.2-201ENST00000417179 352 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 PGBD4P6-201ENST00000421501 610 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 NUP35P1-201ENST00000422734 947 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC063976.3-201ENST00000426849 329 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.71□□□□□ -1.98
CDK3Q00526 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.71□□□□□ -1.98
CDK3Q00526 SNORD109B-201ENST00000458961 67 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 SNORD109A-201ENST00000459128 67 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 RNU7-180P-201ENST00000459240 63 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 snoU109.2-201ENST00000459316 135 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDK3Q00526 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.71□□□□□ -1.98
CDK3Q00526 AC074344.1-201ENST00000512823 224 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 MIR892C-201ENST00000516410 77 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.71□□□□□ -1.98
CDK3Q00526 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.71□□□□□ -1.98
CDK3Q00526 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.71□□□□□ -1.98
CDK3Q00526 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.71□□□□□ -1.98
CDK3Q00526 AC007151.1-201ENST00000572774 483 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC146944.4-201ENST00000602697 718 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC080078.2-201ENST00000603766 501 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC087045.1-201ENST00000605856 382 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC004492.1-201ENST00000607036 742 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 uc_338.34-201ENST00000617467 174 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC068137.3-201ENST00000639191 341 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 AC073869.6-201ENST00000640656 341 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 CDC27P3-201ENST00000635418 1910 ntBASIC2.71□□□□□ -1.98
CDK3Q00526 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDK3Q00526 AC004944.1-201ENST00000517807 3059 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDK3Q00526 MTND5P19-201ENST00000424872 1794 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 RNU6-1090P-201ENST00000364065 94 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 RNU6-1303P-201ENST00000364841 107 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 SNORA16.2-201ENST00000390991 127 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDK3Q00526 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK3Q00526 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.7□□□□□ -1.98
CDK3Q00526 ATG3P1-201ENST00000419507 911 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.7□□□□□ -1.98
CDK3Q00526 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK3Q00526 AC116655.1-201ENST00000508324 901 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDK3Q00526 AC113155.1-201ENST00000511141 769 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.7□□□□□ -1.98
CDK3Q00526 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK3Q00526 SNORD19.2-201ENST00000516978 73 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.7□□□□□ -1.98
CDK3Q00526 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK3Q00526 MTND4P7-201ENST00000523876 130 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 OR5AQ1P-201ENST00000527596 927 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.7□□□□□ -1.98
CDK3Q00526 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK3Q00526 MIR3605-201ENST00000583214 100 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 AC020895.1-201ENST00000595362 272 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK3Q00526 AL162413.1-201ENST00000603198 110 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 AC006023.1-201ENST00000603944 259 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 AC004832.5-201ENST00000608677 401 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 U4.5-201ENST00000617137 123 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.7□□□□□ -1.98
CDK3Q00526 AP003400.5-201ENST00000624827 617 ntBASIC2.7□□□□□ -1.98
CDK3Q00526 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDK3Q00526 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDK3Q00526 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDK3Q00526 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDK3Q00526 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CDK3Q00526 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.69□□□□□ -1.98
CDK3Q00526 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDK3Q00526 Y_RNA.9-201ENST00000362354 101 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 RNU6-859P-201ENST00000362728 107 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 RNU4-12P-201ENST00000365233 139 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 MIR887-201ENST00000401258 79 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 RNU2-52P-201ENST00000410680 190 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 RNU6-607P-201ENST00000411283 108 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 USP9YP27-201ENST00000418455 438 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 TOMM20P4-201ENST00000427861 435 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 AC112220.1-201ENST00000434628 355 ntBASIC2.69□□□□□ -1.98
CDK3Q00526 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.69□□□□□ -1.98
CDK3Q00526 RPS29P6-201ENST00000438196 145 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms