Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC090517.3-201ENST00000625170 141 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.25□□□□□ -2.21
HOXC5Q00444 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HOXC5Q00444 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HOXC5Q00444 RNU6-621P-201ENST00000364752 109 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
HOXC5Q00444 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HOXC5Q00444 RNU11-3P-201ENST00000391111 133 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 MIR1262-201ENST00000408276 93 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.24□□□□□ -2.21
HOXC5Q00444 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AP000949.1-201ENST00000438328 629 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC021146.2-201ENST00000504736 556 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC112198.4-201ENST00000515450 351 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AP003392.2-201ENST00000527269 208 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.24□□□□□ -2.21
HOXC5Q00444 DEFB108A-201ENST00000530110 222 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AP000763.2-201ENST00000540641 163 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC135279.1-201ENST00000543493 504 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC136619.2-201ENST00000563361 631 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC023813.2-201ENST00000564321 469 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC103987.3-201ENST00000582071 292 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC009977.1-201ENST00000586015 570 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.24□□□□□ -2.21
HOXC5Q00444 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC068620.3-201ENST00000602749 560 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC073410.2-201ENST00000603240 332 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC021646.1-201ENST00000605469 484 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXC5Q00444 AC099654.8-201ENST00000637757 681 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 LINC02211-204ENST00000642024 1070 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 ZNF72P-201ENST00000425869 1908 ntBASIC1.24□□□□□ -2.21
HOXC5Q00444 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
HOXC5Q00444 SNORD114-19-201ENST00000363072 75 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 RNU6-1284P-201ENST00000363701 100 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 RNU6-560P-201ENST00000364007 108 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 RNU6-203P-201ENST00000384038 104 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 RNU6-298P-201ENST00000390888 96 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.23□□□□□ -2.21
HOXC5Q00444 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.23□□□□□ -2.21
HOXC5Q00444 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
HOXC5Q00444 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.23□□□□□ -2.21
HOXC5Q00444 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.23□□□□□ -2.21
HOXC5Q00444 AC118469.1-201ENST00000442943 488 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 AL078601.1-201ENST00000444542 271 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.23□□□□□ -2.21
HOXC5Q00444 RPL39P36-201ENST00000490784 156 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.23□□□□□ -2.21
HOXC5Q00444 MTCYBP18-201ENST00000501056 747 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 TPT1P8-201ENST00000510120 555 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 RNU2-53P-201ENST00000516257 147 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 MTND1P36-201ENST00000522384 936 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 AP000907.2-201ENST00000530827 353 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.23□□□□□ -2.21
HOXC5Q00444 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.23□□□□□ -2.21
HOXC5Q00444 IMMP1LP2-201ENST00000552954 492 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.23□□□□□ -2.21
HOXC5Q00444 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.23□□□□□ -2.21
HOXC5Q00444 RNU6-91P-201ENST00000607774 107 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.23□□□□□ -2.21
HOXC5Q00444 Z82243.1-201ENST00000609432 473 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.23□□□□□ -2.21
HOXC5Q00444 RBBP8P1-201ENST00000449447 1844 ntBASIC1.23□□□□□ -2.21
HOXC5Q00444 SNORD116-12-201ENST00000384468 92 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RNU6-1274P-201ENST00000384557 107 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 SNORA67.5-201ENST00000391036 107 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RNA5SP212-201ENST00000391223 107 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RNU2-48P-201ENST00000410694 191 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RNU2-32P-201ENST00000411193 191 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RPS12P24-201ENST00000412619 387 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 VPS26BP1-201ENST00000417155 755 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RAC1P6-201ENST00000423911 575 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 MTCO2P20-201ENST00000437339 673 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 FCF1P6-201ENST00000456841 595 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 AC079395.1-201ENST00000510981 262 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 SNORA19.3-201ENST00000516165 130 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RNU1-92P-201ENST00000517017 135 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
HOXC5Q00444 AP005597.4-201ENST00000526762 229 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.22□□□□□ -2.21
HOXC5Q00444 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.22□□□□□ -2.21
HOXC5Q00444 AC016925.2-201ENST00000605108 242 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 AL050343.2-201ENST00000607338 280 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RNU6-1192P-201ENST00000612197 107 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 AL359314.1-201ENST00000616913 261 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 RNU6-489P-201ENST00000618289 107 ntBASIC1.22□□□□□ -2.21
HOXC5Q00444 AL589994.2-201ENST00000621124 579 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms