Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
YBX1P67809 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.97□□□□□ -1.77
YBX1P67809 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.97□□□□□ -1.77
YBX1P67809 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
YBX1P67809 OR4G2P-202ENST00000641004 1759 ntBASIC3.97□□□□□ -1.77
YBX1P67809 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
YBX1P67809 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
YBX1P67809 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
YBX1P67809 Y_RNA.199-201ENST00000364014 102 ntBASIC3.96□□□□□ -1.78
YBX1P67809 SNORA62.3-201ENST00000365110 153 ntBASIC3.96□□□□□ -1.78
YBX1P67809 RNU6-1181P-201ENST00000384191 106 ntBASIC3.96□□□□□ -1.78
YBX1P67809 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
YBX1P67809 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
YBX1P67809 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.96□□□□□ -1.78
YBX1P67809 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.96□□□□□ -1.78
YBX1P67809 AL356095.1-201ENST00000417217 199 ntBASIC3.96□□□□□ -1.78
YBX1P67809 AC244098.2-201ENST00000422068 99 ntBASIC3.96□□□□□ -1.78
YBX1P67809 AC079780.1-201ENST00000428259 207 ntBASIC3.96□□□□□ -1.78
YBX1P67809 TBCAP1-201ENST00000436520 327 ntBASIC3.96□□□□□ -1.78
YBX1P67809 HIGD1AP2-201ENST00000446367 280 ntBASIC3.96□□□□□ -1.78
YBX1P67809 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
YBX1P67809 AC079354.2-201ENST00000453523 154 ntBASIC3.96□□□□□ -1.78
YBX1P67809 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.96□□□□□ -1.78
YBX1P67809 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.96□□□□□ -1.78
YBX1P67809 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.96□□□□□ -1.78
YBX1P67809 SNORA25.14-201ENST00000516481 132 ntBASIC3.96□□□□□ -1.78
YBX1P67809 Y_RNA.706-201ENST00000516933 99 ntBASIC3.96□□□□□ -1.78
YBX1P67809 CASP1P1-201ENST00000526345 212 ntBASIC3.96□□□□□ -1.78
YBX1P67809 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.96□□□□□ -1.78
YBX1P67809 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.96□□□□□ -1.78
YBX1P67809 SRGNP1-201ENST00000603392 451 ntBASIC3.96□□□□□ -1.78
YBX1P67809 AL161629.2-201ENST00000615347 275 ntBASIC3.96□□□□□ -1.78
YBX1P67809 AL360181.4-201ENST00000621752 134 ntBASIC3.96□□□□□ -1.78
YBX1P67809 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
YBX1P67809 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
YBX1P67809 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
YBX1P67809 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
YBX1P67809 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.96□□□□□ -1.78
YBX1P67809 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.96□□□□□ -1.78
YBX1P67809 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
YBX1P67809 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.95□□□□□ -1.78
YBX1P67809 AC116096.1-201ENST00000566804 2314 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
YBX1P67809 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.95□□□□□ -1.78
YBX1P67809 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.95□□□□□ -1.78
YBX1P67809 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
YBX1P67809 RN7SKP280-201ENST00000364196 304 ntBASIC3.95□□□□□ -1.78
YBX1P67809 SNORD14B-201ENST00000364533 90 ntBASIC3.95□□□□□ -1.78
YBX1P67809 RNA5SP513-201ENST00000364648 118 ntBASIC3.95□□□□□ -1.78
YBX1P67809 RNY3P4-201ENST00000384428 101 ntBASIC3.95□□□□□ -1.78
YBX1P67809 RNU1-13P-201ENST00000384499 162 ntBASIC3.95□□□□□ -1.78
YBX1P67809 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
YBX1P67809 AL079342.1-201ENST00000401460 267 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AL022722.2-201ENST00000402519 180 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.95□□□□□ -1.78
YBX1P67809 RPL23AP83-201ENST00000434984 473 ntBASIC3.95□□□□□ -1.78
YBX1P67809 RPL23AP46-201ENST00000438548 490 ntBASIC3.95□□□□□ -1.78
YBX1P67809 RPL7P49-201ENST00000471402 708 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AC107393.1-201ENST00000512403 346 ntBASIC3.95□□□□□ -1.78
YBX1P67809 RNU7-175P-201ENST00000515915 61 ntBASIC3.95□□□□□ -1.78
YBX1P67809 IGKV2-38-201ENST00000517443 247 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AP002770.2-201ENST00000543613 532 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.95□□□□□ -1.78
YBX1P67809 AC104581.2-201ENST00000572227 430 ntBASIC3.95□□□□□ -1.78
YBX1P67809 MIR3944-201ENST00000581277 108 ntBASIC3.95□□□□□ -1.78
YBX1P67809 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.95□□□□□ -1.78
YBX1P67809 MIR4727-201ENST00000622232 55 ntBASIC3.95□□□□□ -1.78
YBX1P67809 RNA5SP196-201ENST00000625967 102 ntBASIC3.95□□□□□ -1.78
YBX1P67809 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.95□□□□□ -1.78
YBX1P67809 AL773545.4-201ENST00000637262 310 ntBASIC3.95□□□□□ -1.78
YBX1P67809 MIR492-201ENST00000638676 116 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AC132825.6-201ENST00000638861 357 ntBASIC3.95□□□□□ -1.78
YBX1P67809 AL513478.4-201ENST00000641636 310 ntBASIC3.95□□□□□ -1.78
YBX1P67809 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.95□□□□□ -1.78
YBX1P67809 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
YBX1P67809 AC004925.1-201ENST00000624256 2706 ntBASIC3.95□□□□□ -1.78
YBX1P67809 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.95□□□□□ -1.78
YBX1P67809 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
YBX1P67809 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
YBX1P67809 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
YBX1P67809 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.94□□□□□ -1.78
YBX1P67809 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
YBX1P67809 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
YBX1P67809 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
YBX1P67809 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
YBX1P67809 RNA5SP167-201ENST00000365461 116 ntBASIC3.94□□□□□ -1.78
YBX1P67809 MIR10A-201ENST00000385043 110 ntBASIC3.94□□□□□ -1.78
YBX1P67809 MIR514A1-201ENST00000385133 98 ntBASIC3.94□□□□□ -1.78
YBX1P67809 Y_RNA.581-201ENST00000391017 97 ntBASIC3.94□□□□□ -1.78
YBX1P67809 Y_RNA.623-201ENST00000411128 95 ntBASIC3.94□□□□□ -1.78
YBX1P67809 HSPE1P12-201ENST00000412576 301 ntBASIC3.94□□□□□ -1.78
YBX1P67809 MTCO1P39-201ENST00000426148 480 ntBASIC3.94□□□□□ -1.78
YBX1P67809 BX679664.1-201ENST00000434429 253 ntBASIC3.94□□□□□ -1.78
YBX1P67809 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.94□□□□□ -1.78
YBX1P67809 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.94□□□□□ -1.78
YBX1P67809 snoU13.24-201ENST00000458998 104 ntBASIC3.94□□□□□ -1.78
YBX1P67809 Vault.1-201ENST00000516474 102 ntBASIC3.94□□□□□ -1.78
YBX1P67809 RNU7-143P-201ENST00000516781 65 ntBASIC3.94□□□□□ -1.78
YBX1P67809 AC109479.2-201ENST00000517842 174 ntBASIC3.94□□□□□ -1.78
YBX1P67809 AC024405.2-202ENST00000532731 184 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms