Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SNORD17-201ENST00000390930 237 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 MIR548P-201ENST00000408336 84 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
SEC61A1P61619 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.92□□□□□ -1.94
SEC61A1P61619 HMGB1P9-201ENST00000429856 646 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 AC008264.1-201ENST00000447612 367 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 SSXP4-201ENST00000451349 245 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 CECR9-201ENST00000453421 199 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.92□□□□□ -1.94
SEC61A1P61619 AC087588.1-201ENST00000462203 316 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC093663.1-201ENST00000497190 394 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 RNU6-928P-201ENST00000516876 104 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.92□□□□□ -1.94
SEC61A1P61619 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 CYCSP27-201ENST00000527643 293 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.92□□□□□ -1.94
SEC61A1P61619 TRAV28-201ENST00000557548 323 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC007179.3-201ENST00000604976 235 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AL080274.1-201ENST00000605565 220 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 PART1_1.1-201ENST00000611761 217 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC040896.1-201ENST00000613819 479 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 MIR8058-201ENST00000615737 89 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 ATP5A1P2-202ENST00000616464 443 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SEC61A1P61619 AC027309.3-201ENST00000623419 351 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 AC134503.1-201ENST00000633048 54 ntBASIC2.92□□□□□ -1.94
SEC61A1P61619 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
SEC61A1P61619 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
SEC61A1P61619 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
SEC61A1P61619 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A1P61619 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.91□□□□□ -1.94
SEC61A1P61619 Y_RNA.31-201ENST00000362574 102 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 RNU6-95P-201ENST00000384697 107 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 MIR559-201ENST00000385188 96 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RPL5P18-201ENST00000406671 891 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 CYCSP33-201ENST00000414485 327 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RPL7P10-201ENST00000417407 739 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 AL590383.1-201ENST00000428602 75 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AC097713.2-201ENST00000430199 356 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 SNAP23P1-201ENST00000433229 246 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AC244505.4-201ENST00000434905 287 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.91□□□□□ -1.94
SEC61A1P61619 Z82210.1-201ENST00000440037 231 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 SSXP5-201ENST00000443473 287 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RBMY2UP-201ENST00000453474 324 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.91□□□□□ -1.94
SEC61A1P61619 RPL12P25-201ENST00000455592 494 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 Y_RNA.653-201ENST00000459091 95 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 MIR2053-201ENST00000459295 91 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RPL21P10-201ENST00000463521 490 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RPL30P5-201ENST00000494923 336 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AC092436.3-201ENST00000511788 257 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RNU1-86P-201ENST00000516108 154 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RNU1-107P-201ENST00000516617 154 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RNA5SP290-201ENST00000517133 127 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RNU6-1315P-201ENST00000517187 99 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.91□□□□□ -1.94
SEC61A1P61619 IGHV3-76-201ENST00000522465 295 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AC104576.1-201ENST00000524225 88 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A1P61619 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.91□□□□□ -1.94
SEC61A1P61619 AC026371.1-201ENST00000551867 419 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 HMGB1P14-201ENST00000557424 591 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A1P61619 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 AL360085.1-201ENST00000604713 532 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 RNU6-85P-201ENST00000605989 107 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A1P61619 AC107294.1-201ENST00000609524 467 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 MIR7851-201ENST00000610611 160 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 AC010378.1-201ENST00000619270 362 ntBASIC2.91□□□□□ -1.94
SEC61A1P61619 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.91□□□□□ -1.94
SEC61A1P61619 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A1P61619 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SEC61A1P61619 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A1P61619 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A1P61619 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A1P61619 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SEC61A1P61619 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.94
SEC61A1P61619 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
SEC61A1P61619 Y_RNA.146-201ENST00000363549 102 ntBASIC2.9□□□□□ -1.95
SEC61A1P61619 RNA5SP72-201ENST00000364442 117 ntBASIC2.9□□□□□ -1.95
SEC61A1P61619 Y_RNA.245-201ENST00000364493 95 ntBASIC2.9□□□□□ -1.95
SEC61A1P61619 Y_RNA.445-201ENST00000384168 102 ntBASIC2.9□□□□□ -1.95
SEC61A1P61619 Y_RNA.482-201ENST00000384377 111 ntBASIC2.9□□□□□ -1.95
SEC61A1P61619 RNU6-692P-201ENST00000384496 107 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms