Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RPL36AP48-201ENST00000485521 314 ntBASIC1.83□□□□□ -2.12
VSX2P58304 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
VSX2P58304 OR5AQ1P-201ENST00000527596 927 ntBASIC1.83□□□□□ -2.12
VSX2P58304 AP003122.4-201ENST00000530980 758 ntBASIC1.83□□□□□ -2.12
VSX2P58304 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VSX2P58304 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VSX2P58304 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.83□□□□□ -2.12
VSX2P58304 BNIP3P10-201ENST00000605360 577 ntBASIC1.83□□□□□ -2.12
VSX2P58304 AC121334.2-201ENST00000605387 271 ntBASIC1.83□□□□□ -2.12
VSX2P58304 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
VSX2P58304 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.83□□□□□ -2.12
VSX2P58304 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.83□□□□□ -2.12
VSX2P58304 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
VSX2P58304 AC091932.3-201ENST00000624223 323 ntBASIC1.83□□□□□ -2.12
VSX2P58304 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VSX2P58304 RNU6-500P-201ENST00000362349 107 ntBASIC1.82□□□□□ -2.12
VSX2P58304 RNU5F-6P-201ENST00000362979 116 ntBASIC1.82□□□□□ -2.12
VSX2P58304 RNU1-148P-201ENST00000384472 162 ntBASIC1.82□□□□□ -2.12
VSX2P58304 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VSX2P58304 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VSX2P58304 U8.13-201ENST00000390842 128 ntBASIC1.82□□□□□ -2.12
VSX2P58304 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
VSX2P58304 FTH1P15-201ENST00000406984 280 ntBASIC1.82□□□□□ -2.12
VSX2P58304 RNU6-1025P-201ENST00000410629 104 ntBASIC1.82□□□□□ -2.12
VSX2P58304 RPL23AP39-201ENST00000415533 405 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC016831.2-201ENST00000417179 352 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.82□□□□□ -2.12
VSX2P58304 AC097463.2-201ENST00000421074 142 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AL591704.1-201ENST00000432574 275 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AL008629.1-201ENST00000438615 184 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AL590365.1-201ENST00000450788 243 ntBASIC1.82□□□□□ -2.12
VSX2P58304 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.82□□□□□ -2.12
VSX2P58304 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.82□□□□□ -2.12
VSX2P58304 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.82□□□□□ -2.12
VSX2P58304 AC023194.1-201ENST00000493084 308 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC026801.1-201ENST00000497178 464 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC008526.1-201ENST00000509149 338 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AF213884.2-201ENST00000510417 903 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.82□□□□□ -2.12
VSX2P58304 RNU6-295P-201ENST00000516901 104 ntBASIC1.82□□□□□ -2.12
VSX2P58304 RNA5SP337-201ENST00000517007 109 ntBASIC1.82□□□□□ -2.12
VSX2P58304 OR11H5P-201ENST00000554039 926 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC110588.1-201ENST00000559699 137 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.82□□□□□ -2.12
VSX2P58304 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VSX2P58304 MTCYBP22-201ENST00000603788 447 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AC022202.1-201ENST00000613515 211 ntBASIC1.82□□□□□ -2.12
VSX2P58304 AL161423.1-201ENST00000613700 262 ntBASIC1.82□□□□□ -2.12
VSX2P58304 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
VSX2P58304 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.82□□□□□ -2.12
VSX2P58304 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
VSX2P58304 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VSX2P58304 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
VSX2P58304 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VSX2P58304 RNU6-39P-201ENST00000384344 107 ntBASIC1.81□□□□□ -2.12
VSX2P58304 SNORD115.1-201ENST00000391109 76 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AL030996.1-201ENST00000411430 235 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.81□□□□□ -2.12
VSX2P58304 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
VSX2P58304 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.81□□□□□ -2.12
VSX2P58304 RPL7P43-201ENST00000478876 753 ntBASIC1.81□□□□□ -2.12
VSX2P58304 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.81□□□□□ -2.12
VSX2P58304 RNU2-10P-201ENST00000516375 211 ntBASIC1.81□□□□□ -2.12
VSX2P58304 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
VSX2P58304 RNU6-1315P-201ENST00000517187 99 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.81□□□□□ -2.12
VSX2P58304 AL133241.1-201ENST00000556832 487 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AC012435.1-202ENST00000568772 240 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.81□□□□□ -2.12
VSX2P58304 MIR1273C-201ENST00000578669 77 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.81□□□□□ -2.12
VSX2P58304 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.81□□□□□ -2.12
VSX2P58304 AL138963.2-201ENST00000605137 226 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AC126118.1-201ENST00000607744 628 ntBASIC1.81□□□□□ -2.12
VSX2P58304 AC138627.2-201ENST00000624202 601 ntBASIC1.81□□□□□ -2.12
VSX2P58304 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
VSX2P58304 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VSX2P58304 RNU6-486P-201ENST00000363116 107 ntBASIC1.8□□□□□ -2.12
VSX2P58304 RNU6-501P-201ENST00000364072 100 ntBASIC1.8□□□□□ -2.12
VSX2P58304 MIR301A-201ENST00000385261 86 ntBASIC1.8□□□□□ -2.12
VSX2P58304 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.8□□□□□ -2.12
VSX2P58304 SNORA26.9-201ENST00000391322 122 ntBASIC1.8□□□□□ -2.12
VSX2P58304 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.8□□□□□ -2.12
VSX2P58304 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.8□□□□□ -2.12
VSX2P58304 AIMP1P2-201ENST00000425294 312 ntBASIC1.8□□□□□ -2.12
VSX2P58304 RPL23AP30-201ENST00000432419 501 ntBASIC1.8□□□□□ -2.12
VSX2P58304 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
VSX2P58304 HMGN2P23-201ENST00000456759 269 ntBASIC1.8□□□□□ -2.12
VSX2P58304 snoU109.2-201ENST00000459316 135 ntBASIC1.8□□□□□ -2.12
VSX2P58304 Y_RNA.638-201ENST00000459374 113 ntBASIC1.8□□□□□ -2.12
VSX2P58304 AC007182.2-201ENST00000489251 402 ntBASIC1.8□□□□□ -2.12
VSX2P58304 AC010587.1-201ENST00000505809 469 ntBASIC1.8□□□□□ -2.12
VSX2P58304 RNA5SP112-201ENST00000515937 99 ntBASIC1.8□□□□□ -2.12
VSX2P58304 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.8□□□□□ -2.12
VSX2P58304 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.8□□□□□ -2.12
VSX2P58304 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.8□□□□□ -2.12
VSX2P58304 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.8□□□□□ -2.12
VSX2P58304 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.8□□□□□ -2.12
VSX2P58304 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms