Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL591034.2-201ENST00000402839 359 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 RNU6-757P-201ENST00000410334 100 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN6P56747 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN6P56747 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN6P56747 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.72□□□□□ -2.13
CLDN6P56747 SNORD97-201ENST00000459187 142 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 RNU7-95P-201ENST00000459222 64 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN6P56747 HMGB1P35-201ENST00000503360 598 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.72□□□□□ -2.13
CLDN6P56747 AC112206.4-201ENST00000515142 405 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 RNU5B-3P-201ENST00000516601 115 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 RNU6-1315P-201ENST00000517187 99 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN6P56747 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN6P56747 RNU6-91P-201ENST00000607774 107 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 AP002371.2-201ENST00000624450 503 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CLDN6P56747 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 AC009487.4-201ENST00000624969 3585 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLDN6P56747 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLDN6P56747 Y_RNA.40-201ENST00000362645 93 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CLDN6P56747 SNORA40C-201ENST00000391285 128 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 RNU6-1025P-201ENST00000410629 104 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 RNU2-40P-201ENST00000410833 196 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 RPS15AP12-201ENST00000419498 388 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.71□□□□□ -2.14
CLDN6P56747 XKRYP1-201ENST00000423438 492 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 HMGN2P19-201ENST00000425149 265 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AC092648.1-201ENST00000425870 423 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 XKRYP2-201ENST00000432915 492 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AL645568.3-201ENST00000433683 316 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AL353689.1-201ENST00000438895 199 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 DNAJC19P4-201ENST00000440115 345 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN6P56747 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN6P56747 SSXP1-201ENST00000453640 473 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 MTATP6P14-201ENST00000455189 673 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN6P56747 USP9YP25-201ENST00000457708 443 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN6P56747 RPS3AP22-201ENST00000488297 769 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN6P56747 AC023050.2-201ENST00000544968 387 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 ARL2BPP2-201ENST00000550907 489 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN6P56747 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN6P56747 AL096840.1-201ENST00000603287 93 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 NDUFA8P1-201ENST00000605525 367 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AC098657.3-201ENST00000620434 263 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 AC092104.1-201ENST00000497346 1441 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 KPNA2P1-201ENST00000458289 1591 ntBASIC1.71□□□□□ -2.14
CLDN6P56747 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLDN6P56747 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN6P56747 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
CLDN6P56747 RNU1-23P-201ENST00000363361 144 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 SMIM11P1-201ENST00000369586 178 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RNU6-1032P-201ENST00000384100 107 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 Y_RNA.534-201ENST00000384599 112 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 FTH1P15-201ENST00000406984 280 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RNU2-36P-201ENST00000410361 191 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RNU2-62P-201ENST00000410868 191 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RNA5SP450-201ENST00000411206 102 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN6P56747 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN6P56747 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN6P56747 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN6P56747 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN6P56747 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN6P56747 USP9YP15-201ENST00000442391 422 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RPL23AP3-201ENST00000453844 468 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN6P56747 AC093899.1-201ENST00000457984 376 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RPL7P43-201ENST00000478876 753 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC104685.1-201ENST00000502445 371 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 MRPS17P9-201ENST00000511924 393 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RNU6-677P-201ENST00000516914 101 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC034114.1-201ENST00000520293 285 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 MTATP6P15-201ENST00000527233 835 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 OR5B19P-201ENST00000531766 928 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN6P56747 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.7□□□□□ -2.14
CLDN6P56747 DNAJC19P9-201ENST00000555084 351 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN6P56747 MIR4299-201ENST00000577899 72 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 MIR4509-3-201ENST00000578671 94 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN6P56747 MIR3146-201ENST00000580367 79 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 MIR4509-2-201ENST00000583920 94 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AP000860.1-201ENST00000605250 559 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 RNU4-5P-201ENST00000607255 135 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC022893.3-201ENST00000607665 437 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AC096772.1-201ENST00000609146 564 ntBASIC1.7□□□□□ -2.14
CLDN6P56747 AL365204.3-201ENST00000612448 685 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms