Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.46□□□□□ -2.02
VCPP55072 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.46□□□□□ -2.02
VCPP55072 Vault.3-201ENST00000516676 95 ntBASIC2.46□□□□□ -2.02
VCPP55072 RNU6-677P-201ENST00000516914 101 ntBASIC2.46□□□□□ -2.02
VCPP55072 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.46□□□□□ -2.02
VCPP55072 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.46□□□□□ -2.02
VCPP55072 BTF3P12-201ENST00000519620 469 ntBASIC2.46□□□□□ -2.02
VCPP55072 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.46□□□□□ -2.02
VCPP55072 AP002453.2-201ENST00000533503 320 ntBASIC2.46□□□□□ -2.02
VCPP55072 AC087241.2-201ENST00000535801 324 ntBASIC2.46□□□□□ -2.02
VCPP55072 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
VCPP55072 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.46□□□□□ -2.02
VCPP55072 MIR3167-201ENST00000579623 85 ntBASIC2.46□□□□□ -2.02
VCPP55072 AC174048.1-201ENST00000603389 144 ntBASIC2.46□□□□□ -2.02
VCPP55072 BNIP3P9-201ENST00000603714 553 ntBASIC2.46□□□□□ -2.02
VCPP55072 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
VCPP55072 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VCPP55072 MTND4P35-201ENST00000604257 1375 ntBASIC2.46□□□□□ -2.02
VCPP55072 FARSBP1-201ENST00000435808 1778 ntBASIC2.46□□□□□ -2.02
VCPP55072 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VCPP55072 AC010889.1-201ENST00000566193 2666 ntBASIC2.45□□□□□ -2.02
VCPP55072 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
VCPP55072 RNU1-17P-201ENST00000363022 152 ntBASIC2.45□□□□□ -2.02
VCPP55072 RNU6-778P-201ENST00000363269 103 ntBASIC2.45□□□□□ -2.02
VCPP55072 RNU6-1083P-201ENST00000384022 107 ntBASIC2.45□□□□□ -2.02
VCPP55072 RN7SKP32-201ENST00000410167 303 ntBASIC2.45□□□□□ -2.02
VCPP55072 RNU6-248P-201ENST00000410720 107 ntBASIC2.45□□□□□ -2.02
VCPP55072 RNU6-195P-201ENST00000411352 109 ntBASIC2.45□□□□□ -2.02
VCPP55072 AF274854.1-201ENST00000413236 615 ntBASIC2.45□□□□□ -2.02
VCPP55072 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VCPP55072 AL591212.2-201ENST00000433923 257 ntBASIC2.45□□□□□ -2.02
VCPP55072 RPS24P1-201ENST00000438550 371 ntBASIC2.45□□□□□ -2.02
VCPP55072 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.45□□□□□ -2.02
VCPP55072 AC093899.1-201ENST00000457984 376 ntBASIC2.45□□□□□ -2.02
VCPP55072 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.45□□□□□ -2.02
VCPP55072 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.45□□□□□ -2.02
VCPP55072 RNU6-143P-201ENST00000516942 93 ntBASIC2.45□□□□□ -2.02
VCPP55072 AC078814.3-201ENST00000553036 491 ntBASIC2.45□□□□□ -2.02
VCPP55072 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.45□□□□□ -2.02
VCPP55072 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.45□□□□□ -2.02
VCPP55072 AC026464.5-201ENST00000562497 722 ntBASIC2.45□□□□□ -2.02
VCPP55072 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.45□□□□□ -2.02
VCPP55072 MIR3199-1-201ENST00000582434 88 ntBASIC2.45□□□□□ -2.02
VCPP55072 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.45□□□□□ -2.02
VCPP55072 AC010620.1-201ENST00000601088 1102 ntBASIC2.45□□□□□ -2.02
VCPP55072 AC090578.1-201ENST00000604955 591 ntBASIC2.45□□□□□ -2.02
VCPP55072 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VCPP55072 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VCPP55072 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VCPP55072 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VCPP55072 TEX21P-201ENST00000447107 1476 ntBASIC2.45□□□□□ -2.02
VCPP55072 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
VCPP55072 RNU6-169P-201ENST00000365336 107 ntBASIC2.44□□□□□ -2.02
VCPP55072 MIR558-201ENST00000384920 94 ntBASIC2.44□□□□□ -2.02
VCPP55072 MIR489-201ENST00000384923 84 ntBASIC2.44□□□□□ -2.02
VCPP55072 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VCPP55072 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.44□□□□□ -2.02
VCPP55072 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.44□□□□□ -2.02
VCPP55072 NDUFS5P4-201ENST00000412983 318 ntBASIC2.44□□□□□ -2.02
VCPP55072 RPL26P27-201ENST00000414397 437 ntBASIC2.44□□□□□ -2.02
VCPP55072 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.44□□□□□ -2.02
VCPP55072 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.44□□□□□ -2.02
VCPP55072 AC073614.1-201ENST00000438690 650 ntBASIC2.44□□□□□ -2.02
VCPP55072 AL136380.1-201ENST00000447970 162 ntBASIC2.44□□□□□ -2.02
VCPP55072 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.44□□□□□ -2.02
VCPP55072 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.44□□□□□ -2.02
VCPP55072 AC139453.3-201ENST00000493276 369 ntBASIC2.44□□□□□ -2.02
VCPP55072 RPS27AP10-201ENST00000496103 208 ntBASIC2.44□□□□□ -2.02
VCPP55072 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.44□□□□□ -2.02
VCPP55072 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.44□□□□□ -2.02
VCPP55072 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.44□□□□□ -2.02
VCPP55072 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.44□□□□□ -2.02
VCPP55072 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.44□□□□□ -2.02
VCPP55072 SNORA18.6-201ENST00000516792 115 ntBASIC2.44□□□□□ -2.02
VCPP55072 RNU6-295P-201ENST00000516901 104 ntBASIC2.44□□□□□ -2.02
VCPP55072 RNU6-1220P-201ENST00000517126 108 ntBASIC2.44□□□□□ -2.02
VCPP55072 IGLV3-17-201ENST00000519099 244 ntBASIC2.44□□□□□ -2.02
VCPP55072 AC087883.1-201ENST00000551882 391 ntBASIC2.44□□□□□ -2.02
VCPP55072 PRELID2P1-201ENST00000552837 301 ntBASIC2.44□□□□□ -2.02
VCPP55072 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.44□□□□□ -2.02
VCPP55072 AC073544.2-201ENST00000601155 540 ntBASIC2.44□□□□□ -2.02
VCPP55072 AC087752.4-201ENST00000605911 462 ntBASIC2.44□□□□□ -2.02
VCPP55072 AC022893.3-201ENST00000607665 437 ntBASIC2.44□□□□□ -2.02
VCPP55072 AL589743.7-201ENST00000612637 233 ntBASIC2.44□□□□□ -2.02
VCPP55072 AC130324.3-201ENST00000614165 542 ntBASIC2.44□□□□□ -2.02
VCPP55072 AL449363.1-201ENST00000617815 186 ntBASIC2.44□□□□□ -2.02
VCPP55072 Z99571.1-201ENST00000636677 394 ntBASIC2.44□□□□□ -2.02
VCPP55072 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VCPP55072 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.44□□□□□ -2.02
VCPP55072 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VCPP55072 AC110491.1-201ENST00000562191 2010 ntBASIC2.44□□□□□ -2.02
VCPP55072 Y_RNA.77-201ENST00000362962 107 ntBASIC2.43□□□□□ -2.02
VCPP55072 Y_RNA.201-201ENST00000364052 96 ntBASIC2.43□□□□□ -2.02
VCPP55072 RNU6-190P-201ENST00000384154 102 ntBASIC2.43□□□□□ -2.02
VCPP55072 MIR218-1-201ENST00000384999 110 ntBASIC2.43□□□□□ -2.02
VCPP55072 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.43□□□□□ -2.02
VCPP55072 AC092809.3-201ENST00000415453 231 ntBASIC2.43□□□□□ -2.02
VCPP55072 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.43□□□□□ -2.02
VCPP55072 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.43□□□□□ -2.02
VCPP55072 MED13P1-201ENST00000428342 171 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms