Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.75□□□□□ -1.97
LIMK1P53667 SCARNA17.1-201ENST00000516211 143 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 SCARNA17.2-201ENST00000516334 143 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.75□□□□□ -1.97
LIMK1P53667 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.75□□□□□ -1.97
LIMK1P53667 AC024909.2-201ENST00000553035 286 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 AC015712.3-201ENST00000559380 164 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.75□□□□□ -1.97
LIMK1P53667 MTCO3P13-201ENST00000577757 781 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 AC091805.2-201ENST00000603848 235 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 AL138889.2-201ENST00000603883 242 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.75□□□□□ -1.97
LIMK1P53667 AC007684.1-201ENST00000609671 477 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 SCARNA17.4-201ENST00000614296 143 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LIMK1P53667 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
LIMK1P53667 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.75□□□□□ -1.97
LIMK1P53667 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LIMK1P53667 MTND4P27-201ENST00000450813 1354 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LIMK1P53667 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.74□□□□□ -1.97
LIMK1P53667 RNU6-1280P-201ENST00000365211 107 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LIMK1P53667 RNU1-138P-201ENST00000384093 164 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 RNU6-1179P-201ENST00000384667 107 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 GSTA9P-201ENST00000406231 611 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.74□□□□□ -1.97
LIMK1P53667 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.74□□□□□ -1.97
LIMK1P53667 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.74□□□□□ -1.97
LIMK1P53667 AC073464.1-201ENST00000429823 534 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 AL161651.1-201ENST00000440882 223 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 IFNA11P-201ENST00000446352 526 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 RN7SL633P-201ENST00000488974 297 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.74□□□□□ -1.97
LIMK1P53667 GZMAP1-201ENST00000503054 631 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
LIMK1P53667 MTND3P5-201ENST00000512798 333 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 RNU6-581P-201ENST00000516214 105 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 RNA5SP503-201ENST00000517047 117 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 AP003072.2-201ENST00000527756 676 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LIMK1P53667 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.74□□□□□ -1.97
LIMK1P53667 MIR5692A1-201ENST00000580523 69 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 MIR4658-201ENST00000584344 65 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 MIR548AC-201ENST00000585049 88 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.74□□□□□ -1.97
LIMK1P53667 AC004223.2-201ENST00000590309 544 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 AC005261.5-201ENST00000596280 355 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 AC245008.1-201ENST00000608123 476 ntBASIC2.74□□□□□ -1.97
LIMK1P53667 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LIMK1P53667 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.74□□□□□ -1.97
LIMK1P53667 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LIMK1P53667 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
LIMK1P53667 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
LIMK1P53667 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LIMK1P53667 Y_RNA.559-201ENST00000384686 107 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 Y_RNA.582-201ENST00000391023 95 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AL592148.1-201ENST00000413568 445 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AL135786.1-201ENST00000415892 214 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 Z82209.1-201ENST00000422141 2135 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 MTCO3P5-201ENST00000433620 714 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC104058.1-201ENST00000448028 297 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 MTND1P18-201ENST00000448191 573 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMK1P53667 AC003071.1-201ENST00000451219 789 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMK1P53667 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.73□□□□□ -1.97
LIMK1P53667 AL583843.1-201ENST00000456070 346 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 MTCO2P18-201ENST00000457151 658 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 RPS29P15-201ENST00000458329 171 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMK1P53667 TRBV1-201ENST00000476502 284 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC108210.2-201ENST00000503681 201 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC098591.2-201ENST00000510152 315 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
LIMK1P53667 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LIMK1P53667 AC006199.1-201ENST00000548728 219 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMK1P53667 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMK1P53667 AC087683.1-201ENST00000591187 441 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC007938.3-201ENST00000604965 623 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC103591.3-201ENST00000608684 209 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 HMGB1P24-202ENST00000615653 685 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AL359740.1-201ENST00000624340 592 ntBASIC2.73□□□□□ -1.97
LIMK1P53667 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.73□□□□□ -1.97
LIMK1P53667 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
LIMK1P53667 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 RNU4-48P-201ENST00000365559 182 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 RNU6-898P-201ENST00000365627 104 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 OR5H15-201ENST00000383696 930 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 RNU6-19P-201ENST00000384718 107 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 MIR147B-201ENST00000390185 80 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 OR6C66P-201ENST00000414917 930 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 RPL21P90-201ENST00000415692 466 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 MTATP6P18-201ENST00000417994 673 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AC002486.1-201ENST00000435098 391 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AL451074.3-201ENST00000437709 472 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms