Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL23AP20-201ENST00000447965 421 ntBASIC2.67□□□□□ -1.98
LHX1P48742 BTF3P15-201ENST00000455606 336 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC027673.1-201ENST00000456245 405 ntBASIC2.67□□□□□ -1.98
LHX1P48742 FAM92A1P2-202ENST00000504766 877 ntBASIC2.67□□□□□ -1.98
LHX1P48742 SEM1P1-201ENST00000506694 209 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
LHX1P48742 RPL23AP94-201ENST00000512518 302 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 Y_RNA.655-201ENST00000515919 96 ntBASIC2.67□□□□□ -1.98
LHX1P48742 RNA5SP76-201ENST00000516277 87 ntBASIC2.67□□□□□ -1.98
LHX1P48742 SNORD19.2-201ENST00000516978 73 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 AP003034.1-201ENST00000534621 422 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 AC007151.1-201ENST00000572774 483 ntBASIC2.67□□□□□ -1.98
LHX1P48742 MTCO3P13-201ENST00000577757 781 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX1P48742 AC023043.3-201ENST00000593113 385 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AL359198.2-201ENST00000611836 194 ntBASIC2.67□□□□□ -1.98
LHX1P48742 MIR6134-201ENST00000617606 109 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC139792.3-201ENST00000623525 224 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 AC139792.2-201ENST00000624218 587 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC124864.2-201ENST00000624736 186 ntBASIC2.67□□□□□ -1.98
LHX1P48742 IGHVIII-44-202ENST00000636235 289 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC068137.4-201ENST00000638485 296 ntBASIC2.67□□□□□ -1.98
LHX1P48742 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LHX1P48742 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LHX1P48742 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LHX1P48742 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LHX1P48742 MTCO3P40-201ENST00000392516 676 ntBASIC2.66□□□□□ -1.98
LHX1P48742 RNU2-29P-201ENST00000410423 189 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.66□□□□□ -1.98
LHX1P48742 AL627311.1-201ENST00000431514 115 ntBASIC2.66□□□□□ -1.98
LHX1P48742 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX1P48742 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX1P48742 MTND1P1-201ENST00000445453 368 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AL360271.2-201ENST00000447710 161 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AL118520.1-201ENST00000450770 291 ntBASIC2.66□□□□□ -1.98
LHX1P48742 GSTA11P-201ENST00000452866 669 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AC092001.1-201ENST00000453012 261 ntBASIC2.66□□□□□ -1.98
LHX1P48742 GMFBP1-201ENST00000467831 427 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AC091435.1-201ENST00000505442 584 ntBASIC2.66□□□□□ -1.98
LHX1P48742 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LHX1P48742 RNU6-581P-201ENST00000516214 105 ntBASIC2.66□□□□□ -1.98
LHX1P48742 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.66□□□□□ -1.98
LHX1P48742 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.66□□□□□ -1.98
LHX1P48742 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX1P48742 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX1P48742 MTATP6P3-201ENST00000581686 676 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AC005261.5-201ENST00000596280 355 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AC087241.4-201ENST00000612441 480 ntBASIC2.66□□□□□ -1.98
LHX1P48742 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AC093536.2-201ENST00000565257 1406 ntBASIC2.66□□□□□ -1.98
LHX1P48742 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LHX1P48742 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LHX1P48742 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LHX1P48742 CDC27P3-201ENST00000635418 1910 ntBASIC2.66□□□□□ -1.98
LHX1P48742 AC004944.1-201ENST00000517807 3059 ntBASIC2.65□□□□□ -1.98
LHX1P48742 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LHX1P48742 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LHX1P48742 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LHX1P48742 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LHX1P48742 RNU6-1280P-201ENST00000365211 107 ntBASIC2.65□□□□□ -1.99
LHX1P48742 RNU6-996P-201ENST00000365438 107 ntBASIC2.65□□□□□ -1.99
LHX1P48742 Y_RNA.381-201ENST00000365666 102 ntBASIC2.65□□□□□ -1.99
LHX1P48742 Y_RNA.409-201ENST00000383990 98 ntBASIC2.65□□□□□ -1.99
LHX1P48742 RNU6-517P-201ENST00000384362 110 ntBASIC2.65□□□□□ -1.99
LHX1P48742 MIR518C-201ENST00000384822 101 ntBASIC2.65□□□□□ -1.99
LHX1P48742 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.65□□□□□ -1.99
LHX1P48742 OSTCP8-201ENST00000445117 448 ntBASIC2.65□□□□□ -1.99
LHX1P48742 AC104389.3-201ENST00000445629 235 ntBASIC2.65□□□□□ -1.99
LHX1P48742 NDUFB1P2-201ENST00000449477 176 ntBASIC2.65□□□□□ -1.99
LHX1P48742 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.65□□□□□ -1.99
LHX1P48742 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.65□□□□□ -1.99
LHX1P48742 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LHX1P48742 RPL23AP45-201ENST00000476406 468 ntBASIC2.65□□□□□ -1.99
LHX1P48742 HMGB1P30-201ENST00000492455 606 ntBASIC2.65□□□□□ -1.99
LHX1P48742 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.65□□□□□ -1.99
LHX1P48742 RNU6-1178P-201ENST00000516674 107 ntBASIC2.65□□□□□ -1.99
LHX1P48742 RN7SKP219-201ENST00000516825 296 ntBASIC2.65□□□□□ -1.99
LHX1P48742 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
LHX1P48742 CKS1BP7-201ENST00000522230 235 ntBASIC2.65□□□□□ -1.99
LHX1P48742 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.65□□□□□ -1.99
LHX1P48742 AP001893.2-201ENST00000526949 202 ntBASIC2.65□□□□□ -1.99
LHX1P48742 GLYCAM1-201ENST00000546596 285 ntBASIC2.65□□□□□ -1.99
LHX1P48742 AL645944.1-201ENST00000603857 493 ntBASIC2.65□□□□□ -1.99
LHX1P48742 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.65□□□□□ -1.99
LHX1P48742 AC017083.3-201ENST00000609955 700 ntBASIC2.65□□□□□ -1.99
LHX1P48742 AL354950.2-201ENST00000617939 290 ntBASIC2.65□□□□□ -1.99
LHX1P48742 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX1P48742 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
LHX1P48742 Y_RNA.41-201ENST00000362646 102 ntBASIC2.64□□□□□ -1.99
LHX1P48742 SNORD14B-201ENST00000364533 90 ntBASIC2.64□□□□□ -1.99
LHX1P48742 SNORA67.4-201ENST00000384688 142 ntBASIC2.64□□□□□ -1.99
LHX1P48742 MIR10A-201ENST00000385043 110 ntBASIC2.64□□□□□ -1.99
LHX1P48742 RNU6-1158P-201ENST00000391167 107 ntBASIC2.64□□□□□ -1.99
LHX1P48742 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms