Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CXCL12P48061 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.81□□□□□ -2.12
CXCL12P48061 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CXCL12P48061 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CXCL12P48061 NACAP2-201ENST00000318548 624 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 RNA5SP160-201ENST00000364866 120 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 RNU5E-5P-201ENST00000365379 116 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 SNORA51.11-201ENST00000384442 131 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 RNU6-817P-201ENST00000391083 104 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CXCL12P48061 U3.40-201ENST00000408706 208 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL12P48061 AC092809.3-201ENST00000415453 231 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL12P48061 SEPT2P1-201ENST00000419651 180 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 HMGN2P38-201ENST00000423806 265 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC007283.2-201ENST00000424739 197 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC124916.1-201ENST00000444020 547 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 COX6CP12-201ENST00000446748 202 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 HMGN2P10-201ENST00000448085 265 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL021397.1-201ENST00000451806 248 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 KATNBL1P6-201ENST00000453433 915 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 MTND1P12-201ENST00000455231 147 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL121769.1-201ENST00000469473 401 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 BZW1P2-201ENST00000473537 826 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AP000797.1-201ENST00000478870 387 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 RPS3AP22-201ENST00000488297 769 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC140059.1-201ENST00000489238 361 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC090255.1-201ENST00000495779 349 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL12P48061 NDUFB4P2-201ENST00000509515 391 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL12P48061 MRPS33P3-201ENST00000513456 322 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL12P48061 SNORA31.6-201ENST00000516241 130 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 MIR514B-201ENST00000516774 80 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 RNU6-1092P-201ENST00000516955 87 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 RNA5SP337-201ENST00000517007 109 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 RNU6-232P-201ENST00000517144 64 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AP003122.4-201ENST00000530980 758 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 LRRC34P1-201ENST00000542742 915 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL12P48061 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL12P48061 ROCK1P1-201ENST00000573767 549 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL12P48061 BNIP3P9-201ENST00000603714 553 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL022161.1-201ENST00000604390 213 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL031775.1-201ENST00000607014 887 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL360219.1-201ENST00000610230 366 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.8□□□□□ -2.12
CXCL12P48061 AC130324.3-201ENST00000614165 542 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL031601.2-202ENST00000622650 282 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.8□□□□□ -2.12
CXCL12P48061 AC079248.2-201ENST00000623779 326 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 AC012640.5-201ENST00000623897 319 ntBASIC1.8□□□□□ -2.12
CXCL12P48061 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CXCL12P48061 AL137003.2-201ENST00000606924 2538 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC005336.3-201ENST00000623833 2679 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CXCL12P48061 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CXCL12P48061 RNU4-1-201ENST00000363925 141 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 RNU6-553P-201ENST00000364047 96 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 Y_RNA.796-201ENST00000364268 102 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 Y_RNA.799-201ENST00000364992 102 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 RNU6-946P-201ENST00000383878 107 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 MIR518E-201ENST00000385252 88 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC096649.2-201ENST00000416186 393 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC006366.1-201ENST00000422002 759 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AL356583.2-201ENST00000426536 280 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 MTND5P25-201ENST00000430499 799 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.79□□□□□ -2.12
CXCL12P48061 NDUFA5P4-201ENST00000436704 385 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 OSTCP8-201ENST00000445117 448 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC245517.4-201ENST00000448601 281 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 MTATP6P7-201ENST00000453315 681 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 RNU6-953P-201ENST00000459154 107 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 RPL30P6-201ENST00000475925 342 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 RPS27P21-201ENST00000486977 252 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 RNU5F-8P-201ENST00000515941 111 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 RNU2-10P-201ENST00000516375 211 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 Y_RNA.717-201ENST00000517106 92 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 SCARNA11.3-201ENST00000517276 130 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC087441.2-201ENST00000529141 262 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC006199.1-201ENST00000548728 219 ntBASIC1.79□□□□□ -2.12
CXCL12P48061 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.79□□□□□ -2.12
CXCL12P48061 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL12P48061 MIR548AB-201ENST00000584917 84 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms