Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC022441.3-201ENST00000605737 136 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 MIR378J-201ENST00000611988 109 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 snoZ196.1-201ENST00000625269 89 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CHRNA4P43681 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.49□□□□□ -1.69
CHRNA4P43681 AL451142.2-201ENST00000429076 2090 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA4P43681 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA4P43681 MIR412-201ENST00000362142 91 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 RNU1-44P-201ENST00000384453 163 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 MIR301A-201ENST00000385261 86 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 UBA52P6-201ENST00000399822 382 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 AC092447.6-201ENST00000414578 210 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 AC119751.6-201ENST00000416712 186 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 AC009963.2-201ENST00000453431 138 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA4P43681 AC108022.1-201ENST00000493466 478 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 AC104164.2-201ENST00000496953 495 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA4P43681 RNU6-638P-201ENST00000516582 104 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 MIR4744-201ENST00000581563 82 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 AC007546.2-201ENST00000623996 360 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 BMS1P21-201ENST00000634565 365 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 MIR3914-2-201ENST00000637339 95 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA4P43681 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA4P43681 AC125257.1-201ENST00000560400 2930 ntBASIC4.48□□□□□ -1.69
CHRNA4P43681 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA4P43681 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA4P43681 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA4P43681 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA4P43681 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 AC009812.4-201ENST00000569134 1805 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA4P43681 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 SNORD14B-201ENST00000364533 90 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 RNU6-32P-201ENST00000383948 107 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 RNU6-13P-201ENST00000384248 107 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 Y_RNA.495-201ENST00000384435 112 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 RNU6-12P-201ENST00000384604 107 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 RNU6-41P-201ENST00000384741 107 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 MIR153-2-201ENST00000385225 87 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHRNA4P43681 RNU6-460P-201ENST00000391158 108 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 AL158823.1-201ENST00000418441 478 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA4P43681 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA4P43681 AL162591.2-201ENST00000449634 317 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 AC092991.1-201ENST00000477176 376 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA4P43681 RNA5SP165-201ENST00000517142 115 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA4P43681 AC008489.1-201ENST00000524271 483 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 AP001328.1-201ENST00000528550 176 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA4P43681 AL391261.3-201ENST00000557194 520 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 HMGB1P14-201ENST00000557424 591 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 AC090877.1-201ENST00000561418 344 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 MIR4782-201ENST00000577987 79 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 LARP7P3-201ENST00000579888 337 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 NF1P5-201ENST00000588287 448 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA4P43681 AC090617.7-201ENST00000623952 126 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 MIR7641-1-201ENST00000627518 61 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 AC068647.2-201ENST00000637380 353 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA4P43681 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA4P43681 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA4P43681 MAPK10-304ENST00000641341 3984 ntBASIC4.47□□□□□ -1.69
CHRNA4P43681 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA4P43681 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHRNA4P43681 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CHRNA4P43681 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CHRNA4P43681 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
CHRNA4P43681 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA4P43681 RNU6-103P-201ENST00000363686 107 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 MIR192-201ENST00000384915 110 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 MIR129-1-201ENST00000384972 72 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 SNORA12.1-201ENST00000390873 148 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 BTF3L4P2-201ENST00000392798 346 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 AL160275.2-201ENST00000412010 394 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA4P43681 RPL12P46-201ENST00000436610 195 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA4P43681 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA4P43681 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA4P43681 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.46□□□□□ -1.7
CHRNA4P43681 RPL23AP49-201ENST00000492925 468 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 RPL31P61-201ENST00000496160 376 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA4P43681 RNA5SP497-201ENST00000516081 97 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 RNU6-840P-201ENST00000517275 65 ntBASIC4.46□□□□□ -1.7
CHRNA4P43681 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms