Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RPL27AP5-201ENST00000469428 449 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 AC098799.2-201ENST00000509466 868 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 SNORA14.1-201ENST00000516113 141 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 MIR892C-201ENST00000516410 77 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 RNU6-572P-201ENST00000516724 80 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 RN7SKP57-201ENST00000517248 293 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 RPL7P20-201ENST00000520308 745 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 AP002404.1-201ENST00000532005 451 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 AP000867.2-201ENST00000532468 320 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN9P43378 AL121579.1-201ENST00000555129 305 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN9P43378 H3F3AP1-201ENST00000559984 334 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 AL031601.2-202ENST00000622650 282 ntBASIC3.1□□□□□ -1.91
PTPN9P43378 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN9P43378 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN9P43378 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN9P43378 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN9P43378 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
PTPN9P43378 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN9P43378 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN9P43378 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PTPN9P43378 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AL353729.1-201ENST00000425044 720 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 MTCO3P46-201ENST00000425787 232 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN9P43378 RPL26P9-201ENST00000457466 433 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 RNU7-23P-201ENST00000459465 62 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AC128713.1-201ENST00000471495 306 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 RPS26P21-201ENST00000475397 348 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 RPS29P2-201ENST00000479278 136 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN9P43378 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
PTPN9P43378 MTND3P25-201ENST00000509243 135 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AC025465.4-201ENST00000513422 638 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AC046134.1-201ENST00000514454 666 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 SNORA25.17-201ENST00000517184 124 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.09□□□□□ -1.91
PTPN9P43378 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN9P43378 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN9P43378 MIR4782-201ENST00000577987 79 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AC011712.1-201ENST00000588959 234 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AC022306.2-201ENST00000617563 647 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AL136221.1-201ENST00000621449 509 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 AC100810.6-201ENST00000638068 285 ntBASIC3.09□□□□□ -1.91
PTPN9P43378 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PTPN9P43378 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.92
PTPN9P43378 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPN9P43378 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PTPN9P43378 MAPK10-322ENST00000641485 4530 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN9P43378 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN9P43378 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN9P43378 SNORA72.1-201ENST00000363485 129 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 SNORD113-7-201ENST00000363762 77 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 RNA5SP219-201ENST00000390940 113 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 RNU6-510P-201ENST00000391239 108 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AL592148.1-201ENST00000413568 445 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 CYCSP33-201ENST00000414485 327 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPN9P43378 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN9P43378 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN9P43378 NDUFA5P4-201ENST00000436704 385 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AC098614.3-201ENST00000438957 440 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AL671855.1-201ENST00000446875 1203 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN9P43378 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN9P43378 snoU13.28-201ENST00000459235 104 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN9P43378 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN9P43378 RNU1-86P-201ENST00000516108 154 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 RNU6-1038P-201ENST00000516516 104 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 RNU6-1069P-201ENST00000516612 133 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 RNU1-107P-201ENST00000516617 154 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 RNU6-1183P-201ENST00000517054 60 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AC009812.2-201ENST00000517657 457 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AC069113.1-201ENST00000517763 267 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN9P43378 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN9P43378 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN9P43378 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN9P43378 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN9P43378 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN9P43378 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPN9P43378 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN9P43378 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AC092794.2-201ENST00000620933 563 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AC092435.3-201ENST00000565538 3654 ntBASIC3.08□□□□□ -1.92
PTPN9P43378 AC096644.4-201ENST00000563417 2912 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN9P43378 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
PTPN9P43378 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN9P43378 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PTPN9P43378 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPN9P43378 SNORD3E-201ENST00000362899 217 ntBASIC3.07□□□□□ -1.92
PTPN9P43378 Y_RNA.166-201ENST00000363730 102 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms