Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RPS27AP14-201ENST00000422868 454 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.05□□□□□ -2.08
SSR1P43307 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.05□□□□□ -2.08
SSR1P43307 AL008629.1-201ENST00000438615 184 ntBASIC2.05□□□□□ -2.08
SSR1P43307 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.05□□□□□ -2.08
SSR1P43307 AL078601.1-201ENST00000444542 271 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.05□□□□□ -2.08
SSR1P43307 RNU6-953P-201ENST00000459154 107 ntBASIC2.05□□□□□ -2.08
SSR1P43307 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.05□□□□□ -2.08
SSR1P43307 MTAPP1-201ENST00000489154 819 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AC010486.1-201ENST00000511793 424 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AC008549.1-201ENST00000512900 643 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.05□□□□□ -2.08
SSR1P43307 RNU6-201P-201ENST00000517100 61 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.05□□□□□ -2.08
SSR1P43307 ELOCP32-201ENST00000548625 324 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AL157871.3-201ENST00000557231 293 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AC233702.2-202ENST00000562547 291 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SSR1P43307 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.05□□□□□ -2.08
SSR1P43307 AC121334.2-201ENST00000605387 271 ntBASIC2.05□□□□□ -2.08
SSR1P43307 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.05□□□□□ -2.08
SSR1P43307 RNU6-748P-201ENST00000384648 107 ntBASIC2.04□□□□□ -2.08
SSR1P43307 RNU6-997P-201ENST00000384725 107 ntBASIC2.04□□□□□ -2.08
SSR1P43307 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSR1P43307 HMGN2P39-201ENST00000398005 273 ntBASIC2.04□□□□□ -2.08
SSR1P43307 RNU2-62P-201ENST00000410868 191 ntBASIC2.04□□□□□ -2.08
SSR1P43307 VN1R36P-201ENST00000414936 291 ntBASIC2.04□□□□□ -2.08
SSR1P43307 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.04□□□□□ -2.08
SSR1P43307 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
SSR1P43307 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.04□□□□□ -2.08
SSR1P43307 RPL23AP30-201ENST00000432419 501 ntBASIC2.04□□□□□ -2.08
SSR1P43307 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.04□□□□□ -2.08
SSR1P43307 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.04□□□□□ -2.08
SSR1P43307 EPS15P1-201ENST00000448836 336 ntBASIC2.04□□□□□ -2.08
SSR1P43307 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.04□□□□□ -2.08
SSR1P43307 SNORD97-201ENST00000459187 142 ntBASIC2.04□□□□□ -2.08
SSR1P43307 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.04□□□□□ -2.08
SSR1P43307 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.04□□□□□ -2.08
SSR1P43307 MRPS33P3-201ENST00000513456 322 ntBASIC2.04□□□□□ -2.08
SSR1P43307 RNU6-677P-201ENST00000516914 101 ntBASIC2.04□□□□□ -2.08
SSR1P43307 RNA5SP337-201ENST00000517007 109 ntBASIC2.04□□□□□ -2.08
SSR1P43307 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.04□□□□□ -2.08
SSR1P43307 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.04□□□□□ -2.08
SSR1P43307 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.04□□□□□ -2.08
SSR1P43307 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.04□□□□□ -2.08
SSR1P43307 MIR4285-201ENST00000581001 85 ntBASIC2.04□□□□□ -2.08
SSR1P43307 AL713866.2-201ENST00000603579 219 ntBASIC2.04□□□□□ -2.08
SSR1P43307 AC022960.3-201ENST00000619794 441 ntBASIC2.04□□□□□ -2.08
SSR1P43307 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.04□□□□□ -2.08
SSR1P43307 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSR1P43307 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
SSR1P43307 RNU1-23P-201ENST00000363361 144 ntBASIC2.03□□□□□ -2.08
SSR1P43307 RNU6-1214P-201ENST00000363650 109 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AC098592.1-201ENST00000419352 333 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AL445646.1-201ENST00000431784 216 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AL353706.1-201ENST00000436728 494 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.03□□□□□ -2.08
SSR1P43307 AL590365.1-201ENST00000450788 243 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.03□□□□□ -2.08
SSR1P43307 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.03□□□□□ -2.08
SSR1P43307 CKS1BP2-201ENST00000497342 240 ntBASIC2.03□□□□□ -2.08
SSR1P43307 RPL38P4-201ENST00000502376 214 ntBASIC2.03□□□□□ -2.08
SSR1P43307 RNU6-1220P-201ENST00000517126 108 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.03□□□□□ -2.08
SSR1P43307 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.03□□□□□ -2.08
SSR1P43307 MTND2P32-201ENST00000521584 1038 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AP003122.4-201ENST00000530980 758 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AC091489.2-201ENST00000566263 604 ntBASIC2.03□□□□□ -2.08
SSR1P43307 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.03□□□□□ -2.08
SSR1P43307 MIR5697-201ENST00000578045 78 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AC112187.2-201ENST00000604345 283 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AC027807.2-201ENST00000616099 408 ntBASIC2.03□□□□□ -2.08
SSR1P43307 AC024940.5-201ENST00000622889 474 ntBASIC2.03□□□□□ -2.08
SSR1P43307 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
SSR1P43307 AC138627.2-201ENST00000624202 601 ntBASIC2.03□□□□□ -2.08
SSR1P43307 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SSR1P43307 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SSR1P43307 MIR301A-201ENST00000385261 86 ntBASIC2.02□□□□□ -2.09
SSR1P43307 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AL160275.3-201ENST00000423876 471 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AL593851.1-201ENST00000426171 157 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.02□□□□□ -2.09
SSR1P43307 CALM2P2-201ENST00000428512 440 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.02□□□□□ -2.09
SSR1P43307 AL365184.2-201ENST00000431139 435 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.02□□□□□ -2.09
SSR1P43307 ZNF114P1-201ENST00000453500 292 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AC007182.2-201ENST00000489251 402 ntBASIC2.02□□□□□ -2.09
SSR1P43307 TPT1P8-201ENST00000510120 555 ntBASIC2.02□□□□□ -2.09
SSR1P43307 RNA5SP137-201ENST00000516833 135 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AC022880.1-201ENST00000534017 973 ntBASIC2.02□□□□□ -2.09
SSR1P43307 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSR1P43307 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSR1P43307 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSR1P43307 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.02□□□□□ -2.09
SSR1P43307 AC092325.1-201ENST00000566449 554 ntBASIC2.02□□□□□ -2.09
SSR1P43307 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SSR1P43307 AL670379.10-201ENST00000604330 253 ntBASIC2.02□□□□□ -2.09
SSR1P43307 AL670379.9-201ENST00000605428 253 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms