Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNU6-826P-201ENST00000516827 104 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.74□□□□□ -1.97
HNF4AP41235 MTND1P35-201ENST00000526739 508 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.74□□□□□ -1.97
HNF4AP41235 AC109635.3-201ENST00000529536 185 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.74□□□□□ -1.97
HNF4AP41235 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.74□□□□□ -1.97
HNF4AP41235 AL512310.1-201ENST00000548639 172 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC008752.3-201ENST00000588113 712 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC008121.1-201ENST00000603244 268 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC104763.2-201ENST00000604179 382 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC091152.3-201ENST00000604227 325 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC007621.1-201ENST00000604544 437 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC008536.2-201ENST00000607284 349 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HNF4AP41235 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HNF4AP41235 AC002553.4-201ENST00000616896 331 ntBASIC2.74□□□□□ -1.97
HNF4AP41235 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.74□□□□□ -1.97
HNF4AP41235 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.74□□□□□ -1.97
HNF4AP41235 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HNF4AP41235 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HNF4AP41235 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.74□□□□□ -1.97
HNF4AP41235 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HNF4AP41235 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HNF4AP41235 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 Y_RNA.89-201ENST00000363031 102 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RNU6-1322P-201ENST00000364309 107 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RNU6-534P-201ENST00000364877 106 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 Y_RNA.481-201ENST00000384373 102 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RNU6-19P-201ENST00000384718 107 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 MIR181A2-201ENST00000384863 110 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HNF4AP41235 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RNU6-908P-201ENST00000410160 94 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RNU2-39P-201ENST00000410604 198 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HNF4AP41235 AL592045.1-201ENST00000429867 352 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.73□□□□□ -1.97
HNF4AP41235 AC006512.1-201ENST00000468816 291 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.73□□□□□ -1.97
HNF4AP41235 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.73□□□□□ -1.97
HNF4AP41235 AC116353.2-201ENST00000505332 712 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.73□□□□□ -1.97
HNF4AP41235 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HNF4AP41235 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.73□□□□□ -1.97
HNF4AP41235 RNU6-1281P-201ENST00000516223 105 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RNU6-1092P-201ENST00000516955 87 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RNU6-835P-201ENST00000516974 104 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.73□□□□□ -1.97
HNF4AP41235 AP001646.1-201ENST00000527936 915 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.73□□□□□ -1.97
HNF4AP41235 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.73□□□□□ -1.97
HNF4AP41235 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HNF4AP41235 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 RPL12P50-201ENST00000603116 116 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 AC104458.1-201ENST00000608243 463 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HNF4AP41235 AL589994.2-201ENST00000621124 579 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 U6.99-201ENST00000637524 83 ntBASIC2.73□□□□□ -1.97
HNF4AP41235 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.73□□□□□ -1.97
HNF4AP41235 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 ASNSP3-201ENST00000451989 1306 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 RNA5SP393-201ENST00000363423 117 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 Y_RNA.295-201ENST00000364918 102 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HNF4AP41235 SMIM11P1-201ENST00000369586 178 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 SNORA69-201ENST00000383895 132 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 RNU6-641P-201ENST00000384006 107 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 SNORA18.3-201ENST00000384122 132 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 UBA52P6-201ENST00000399822 382 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AL139095.1-201ENST00000404326 391 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AL592148.1-201ENST00000413568 445 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 OR51A5P-201ENST00000415429 942 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
HNF4AP41235 MTND4LP11-201ENST00000422184 280 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 MTATP6P23-201ENST00000440153 476 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AC016691.1-201ENST00000441321 413 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 BRK1P2-201ENST00000442875 223 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.72□□□□□ -1.97
HNF4AP41235 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 MTND4P18-201ENST00000447010 465 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.72□□□□□ -1.97
HNF4AP41235 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.72□□□□□ -1.97
HNF4AP41235 CACYBPP2-201ENST00000453625 678 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.72□□□□□ -1.97
HNF4AP41235 AC022364.2-201ENST00000457963 554 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AP000852.1-201ENST00000472460 573 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AC083798.1-201ENST00000472671 131 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AC116562.3-201ENST00000506136 177 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HNF4AP41235 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.72□□□□□ -1.97
HNF4AP41235 SNORA40.12-201ENST00000516329 111 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.72□□□□□ -1.97
HNF4AP41235 AC068587.5-201ENST00000528506 175 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.72□□□□□ -1.97
HNF4AP41235 AC010186.2-204ENST00000537668 439 ntBASIC2.72□□□□□ -1.97
HNF4AP41235 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.72□□□□□ -1.97
HNF4AP41235 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.72□□□□□ -1.97
HNF4AP41235 MIR4775-201ENST00000581168 75 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms