Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
GRIK1P39086 Z82217.1-201ENST00000625157 8149 ntBASIC4.48□□□□□ -1.69
GRIK1P39086 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
GRIK1P39086 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GRIK1P39086 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GRIK1P39086 AC087190.4-201ENST00000574616 8334 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
GRIK1P39086 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.47□□□□□ -1.69
GRIK1P39086 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
GRIK1P39086 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
GRIK1P39086 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
GRIK1P39086 Y_RNA.441-201ENST00000384123 112 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 SNORA12.2-201ENST00000391040 156 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 Y_RNA.597-201ENST00000410463 100 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 RNU2-61P-201ENST00000411069 191 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 AC010154.1-201ENST00000425857 269 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 MTCO1P39-201ENST00000426148 480 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 FTH1P6-201ENST00000430768 320 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 AL591043.1-201ENST00000432461 424 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.47□□□□□ -1.69
GRIK1P39086 HMGN2P21-201ENST00000447764 270 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 RPS27AP13-201ENST00000498403 237 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 AC025445.1-201ENST00000502728 300 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.47□□□□□ -1.69
GRIK1P39086 AC099522.1-202ENST00000514718 367 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 RNU6-426P-201ENST00000516464 97 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 SNORA31.20-201ENST00000517111 133 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
GRIK1P39086 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GRIK1P39086 AL590705.4-201ENST00000532209 134 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.47□□□□□ -1.69
GRIK1P39086 MIR492-201ENST00000638676 116 ntBASIC4.47□□□□□ -1.69
GRIK1P39086 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GRIK1P39086 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GRIK1P39086 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
GRIK1P39086 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.47□□□□□ -1.69
GRIK1P39086 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
GRIK1P39086 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
GRIK1P39086 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
GRIK1P39086 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
GRIK1P39086 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GRIK1P39086 RNA5SP205-201ENST00000364653 136 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 Y_RNA.272-201ENST00000364696 102 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 Y_RNA.275-201ENST00000364726 110 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 Y_RNA.343-201ENST00000365354 112 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 RNA5SP167-201ENST00000365461 116 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 RNU6-1181P-201ENST00000384191 106 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.46□□□□□ -1.7
GRIK1P39086 RPL23AP46-201ENST00000438548 490 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 Y_RNA.638-201ENST00000459374 113 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.46□□□□□ -1.7
GRIK1P39086 SUMO2P6-201ENST00000505273 288 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 Vault.1-201ENST00000516474 102 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 MIR2116-201ENST00000517221 80 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 HMGB1P14-201ENST00000557424 591 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 AC005255.1-201ENST00000593748 216 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 VN1R85P-201ENST00000601587 426 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 MIR4679-1-201ENST00000637619 75 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 AC135776.4-201ENST00000624300 1904 ntBASIC4.46□□□□□ -1.7
GRIK1P39086 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GRIK1P39086 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GRIK1P39086 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
GRIK1P39086 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
GRIK1P39086 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GRIK1P39086 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
GRIK1P39086 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
GRIK1P39086 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
GRIK1P39086 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
GRIK1P39086 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.45□□□□□ -1.7
GRIK1P39086 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.45□□□□□ -1.7
GRIK1P39086 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
GRIK1P39086 RNU6-173P-201ENST00000364215 104 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
GRIK1P39086 RNU6-76P-201ENST00000384060 104 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 RNU6-926P-201ENST00000384075 107 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 RNA5SP317-201ENST00000410176 116 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 RNU6-257P-201ENST00000410238 98 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 RNA5SP311-201ENST00000411290 116 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 AC063979.1-201ENST00000415539 377 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.45□□□□□ -1.7
GRIK1P39086 AL353621.1-201ENST00000418219 243 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.45□□□□□ -1.7
GRIK1P39086 USP9YP7-201ENST00000436723 430 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.45□□□□□ -1.7
GRIK1P39086 USP9YP32-201ENST00000452432 430 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 RNU6-1037P-201ENST00000459571 107 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.45□□□□□ -1.7
GRIK1P39086 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.45□□□□□ -1.7
GRIK1P39086 AC104164.2-201ENST00000496953 495 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 RNA5SP315-201ENST00000516340 116 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 RNA5SP312-201ENST00000517068 116 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.45□□□□□ -1.7
GRIK1P39086 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GRIK1P39086 RN7SL600P-201ENST00000581811 299 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 MIR548AC-201ENST00000585049 88 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.45□□□□□ -1.7
GRIK1P39086 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
GRIK1P39086 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
GRIK1P39086 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms