Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC107075.1-201ENST00000613695 314 ntBASIC1.5□□□□□ -2.17
COL18A1P39060 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
COL18A1P39060 RNU6-462P-201ENST00000362659 105 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 RNU6-621P-201ENST00000364752 109 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 RNU6-19P-201ENST00000384718 107 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 MIR218-1-201ENST00000384999 110 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 RN7SKP158-201ENST00000410453 326 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.49□□□□□ -2.17
COL18A1P39060 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 HMGN2P10-201ENST00000448085 265 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 RPL22P13-201ENST00000493291 347 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC116353.3-201ENST00000511215 249 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 RNU6-703P-201ENST00000516946 107 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.49□□□□□ -2.17
COL18A1P39060 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.49□□□□□ -2.17
COL18A1P39060 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.49□□□□□ -2.17
COL18A1P39060 MIR3167-201ENST00000579623 85 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC024619.4-201ENST00000580924 316 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC091057.3-201ENST00000602684 733 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC025588.2-201ENST00000604851 466 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AL450336.1-201ENST00000605180 586 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC245297.2-201ENST00000610119 565 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 PART1_2.1-201ENST00000612397 250 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AL121895.2-201ENST00000619558 447 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.49□□□□□ -2.17
COL18A1P39060 AL359854.1-201ENST00000614203 1594 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
COL18A1P39060 RNU6-853P-201ENST00000364306 107 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 Y_RNA.465-201ENST00000384293 102 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AL359704.1-201ENST00000411586 781 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 RPS24P7-201ENST00000416921 246 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
COL18A1P39060 MTCO1P27-201ENST00000448269 226 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 PSPHP1-201ENST00000450062 261 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.49□□□□□ -2.17
COL18A1P39060 HMGB1P36-201ENST00000487709 576 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
COL18A1P39060 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 AC118273.2-201ENST00000532092 465 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 MTCO2P15-201ENST00000532655 656 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AL133153.1-201ENST00000557756 303 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL18A1P39060 AC007038.2-201ENST00000608095 740 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC131235.4-201ENST00000609288 620 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.49□□□□□ -2.17
COL18A1P39060 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
COL18A1P39060 MTND5P33-201ENST00000571250 1450 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 NACAP2-201ENST00000318548 624 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 RNU6-234P-201ENST00000365229 104 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COL18A1P39060 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.48□□□□□ -2.17
COL18A1P39060 MTATP6P20-201ENST00000414147 562 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 CYCSP48-201ENST00000417124 323 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.48□□□□□ -2.17
COL18A1P39060 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.48□□□□□ -2.17
COL18A1P39060 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL18A1P39060 RNA5SP233-201ENST00000459153 113 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 RPL30P12-201ENST00000474666 353 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 RPF2P2-201ENST00000504693 896 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 SNORA31.6-201ENST00000516241 130 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 RNU6-143P-201ENST00000516942 93 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
COL18A1P39060 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.48□□□□□ -2.17
COL18A1P39060 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.48□□□□□ -2.17
COL18A1P39060 AC022662.1-201ENST00000580252 331 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 AL355598.1-201ENST00000604169 202 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 AC112204.3-201ENST00000623822 332 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 AP003400.5-201ENST00000624827 617 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 AL138960.2-201ENST00000625145 535 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 AC097655.1-201ENST00000635075 318 ntBASIC1.48□□□□□ -2.17
COL18A1P39060 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL18A1P39060 SNORA3A-201ENST00000364113 130 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 RNA5SP240-201ENST00000365355 128 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 RN7SKP266-201ENST00000410232 287 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 ISCA1P1-201ENST00000426679 387 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.47□□□□□ -2.17
COL18A1P39060 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.47□□□□□ -2.17
COL18A1P39060 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.47□□□□□ -2.17
COL18A1P39060 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.47□□□□□ -2.17
COL18A1P39060 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.47□□□□□ -2.17
COL18A1P39060 AC005410.1-202ENST00000460347 485 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 RPS27P21-201ENST00000486977 252 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL18A1P39060 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.47□□□□□ -2.17
COL18A1P39060 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.47□□□□□ -2.17
COL18A1P39060 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.47□□□□□ -2.17
COL18A1P39060 AL133241.1-201ENST00000556832 487 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.47□□□□□ -2.17
COL18A1P39060 RN7SL793P-201ENST00000583259 296 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 VN1R107P-201ENST00000601784 209 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AC008121.1-201ENST00000603244 268 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AC009090.3-201ENST00000616553 565 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 AC099786.3-201ENST00000565735 1410 ntBASIC1.47□□□□□ -2.17
COL18A1P39060 Y_RNA.393-201ENST00000383936 102 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms