Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU1-57P-201ENST00000384491 166 ntBASIC1.5□□□□□ -2.17
RPA3P35244 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RPA3P35244 SNORA40C-201ENST00000391285 128 ntBASIC1.5□□□□□ -2.17
RPA3P35244 MIR1283-2-201ENST00000408621 87 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AC074117.2-201ENST00000417130 397 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.5□□□□□ -2.17
RPA3P35244 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.5□□□□□ -2.17
RPA3P35244 AMD1P1-201ENST00000457220 922 ntBASIC1.5□□□□□ -2.17
RPA3P35244 MTND1P3-201ENST00000484956 952 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.5□□□□□ -2.17
RPA3P35244 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
RPA3P35244 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.5□□□□□ -2.17
RPA3P35244 AC010587.2-201ENST00000511727 448 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AC091965.2-201ENST00000512324 613 ntBASIC1.5□□□□□ -2.17
RPA3P35244 RNU6-586P-201ENST00000517265 104 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AC135279.1-201ENST00000543493 504 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.5□□□□□ -2.17
RPA3P35244 MIR4524B-201ENST00000581569 115 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AL353997.5-201ENST00000618886 171 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AL589994.2-201ENST00000621124 579 ntBASIC1.5□□□□□ -2.17
RPA3P35244 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
RPA3P35244 RNU6-858P-201ENST00000362436 107 ntBASIC1.49□□□□□ -2.17
RPA3P35244 RNU5E-1-201ENST00000362477 120 ntBASIC1.49□□□□□ -2.17
RPA3P35244 U8.3-201ENST00000363321 132 ntBASIC1.49□□□□□ -2.17
RPA3P35244 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.49□□□□□ -2.17
RPA3P35244 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
RPA3P35244 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
RPA3P35244 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
RPA3P35244 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RPA3P35244 MIR1305-201ENST00000408300 86 ntBASIC1.49□□□□□ -2.17
RPA3P35244 SNORD56-201ENST00000413522 71 ntBASIC1.49□□□□□ -2.17
RPA3P35244 RAC1P6-201ENST00000423911 575 ntBASIC1.49□□□□□ -2.17
RPA3P35244 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.49□□□□□ -2.17
RPA3P35244 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.49□□□□□ -2.17
RPA3P35244 TIMM9P1-201ENST00000436122 256 ntBASIC1.49□□□□□ -2.17
RPA3P35244 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.49□□□□□ -2.17
RPA3P35244 LARP1BP3-201ENST00000437229 869 ntBASIC1.49□□□□□ -2.17
RPA3P35244 EEF1A1P39-201ENST00000440791 250 ntBASIC1.49□□□□□ -2.17
RPA3P35244 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.49□□□□□ -2.17
RPA3P35244 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
RPA3P35244 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.49□□□□□ -2.17
RPA3P35244 RNU6-953P-201ENST00000459154 107 ntBASIC1.49□□□□□ -2.17
RPA3P35244 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.49□□□□□ -2.17
RPA3P35244 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.49□□□□□ -2.17
RPA3P35244 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.49□□□□□ -2.17
RPA3P35244 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
RPA3P35244 AP004607.1-201ENST00000524456 203 ntBASIC1.49□□□□□ -2.17
RPA3P35244 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.49□□□□□ -2.17
RPA3P35244 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.49□□□□□ -2.17
RPA3P35244 MIR544B-201ENST00000582372 78 ntBASIC1.49□□□□□ -2.17
RPA3P35244 BNIP3P25-201ENST00000596023 559 ntBASIC1.49□□□□□ -2.17
RPA3P35244 SEPT7P9-203ENST00000604116 343 ntBASIC1.49□□□□□ -2.17
RPA3P35244 BCRP9-201ENST00000605312 388 ntBASIC1.49□□□□□ -2.17
RPA3P35244 AC021646.1-201ENST00000605469 484 ntBASIC1.49□□□□□ -2.17
RPA3P35244 AC096772.1-201ENST00000609146 564 ntBASIC1.49□□□□□ -2.17
RPA3P35244 AC093788.1-201ENST00000609356 927 ntBASIC1.49□□□□□ -2.17
RPA3P35244 AL356596.1-201ENST00000624230 379 ntBASIC1.49□□□□□ -2.17
RPA3P35244 RNU6-769P-201ENST00000384407 104 ntBASIC1.48□□□□□ -2.17
RPA3P35244 Y_RNA.534-201ENST00000384599 112 ntBASIC1.48□□□□□ -2.17
RPA3P35244 MIR301A-201ENST00000385261 86 ntBASIC1.48□□□□□ -2.17
RPA3P35244 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RPA3P35244 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.48□□□□□ -2.17
RPA3P35244 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
RPA3P35244 RNU6-1025P-201ENST00000410629 104 ntBASIC1.48□□□□□ -2.17
RPA3P35244 RNU2-48P-201ENST00000410694 191 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AC016831.2-201ENST00000417179 352 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AC138623.1-201ENST00000418060 216 ntBASIC1.48□□□□□ -2.17
RPA3P35244 RPS3AP37-201ENST00000419176 745 ntBASIC1.48□□□□□ -2.17
RPA3P35244 VN1R108P-201ENST00000431580 830 ntBASIC1.48□□□□□ -2.17
RPA3P35244 MTND2P29-201ENST00000438595 412 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA3P35244 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA3P35244 AC020699.1-201ENST00000505161 445 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA3P35244 Y_RNA.675-201ENST00000516389 149 ntBASIC1.48□□□□□ -2.17
RPA3P35244 RNU6-1315P-201ENST00000517187 99 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA3P35244 GNAI2P1-201ENST00000541815 315 ntBASIC1.48□□□□□ -2.17
RPA3P35244 IMMP1LP2-201ENST00000552954 492 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.48□□□□□ -2.17
RPA3P35244 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.48□□□□□ -2.17
RPA3P35244 AC023813.2-201ENST00000564321 469 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AL356432.3-201ENST00000568952 465 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RPA3P35244 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RPA3P35244 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.48□□□□□ -2.17
RPA3P35244 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.48□□□□□ -2.17
RPA3P35244 CLIC4P2-201ENST00000601934 717 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AC073410.2-201ENST00000603240 332 ntBASIC1.48□□□□□ -2.17
RPA3P35244 RNU6-88P-201ENST00000606801 100 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AL359314.1-201ENST00000616913 261 ntBASIC1.48□□□□□ -2.17
RPA3P35244 AL138955.1-201ENST00000622881 1040 ntBASIC1.48□□□□□ -2.17
RPA3P35244 MTND5P42-201ENST00000637720 498 ntBASIC1.48□□□□□ -2.17
RPA3P35244 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RPA3P35244 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.47□□□□□ -2.17
RPA3P35244 RBBP8P1-201ENST00000449447 1844 ntBASIC1.47□□□□□ -2.17
RPA3P35244 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPA3P35244 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
RPA3P35244 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms