Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNORA31.6-201ENST00000516241 130 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 SNORA43.2-201ENST00000516652 128 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 SCARNA20.6-201ENST00000517251 106 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 AC109479.2-201ENST00000517842 174 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ABCD3P28288 AC104027.1-201ENST00000521887 300 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.93□□□□□ -1.94
ABCD3P28288 MTND1P35-201ENST00000526739 508 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ABCD3P28288 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
ABCD3P28288 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.93□□□□□ -1.94
ABCD3P28288 AC023050.3-201ENST00000541142 333 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.93□□□□□ -1.94
ABCD3P28288 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.93□□□□□ -1.94
ABCD3P28288 MIR5004-201ENST00000579078 107 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 MIR3616-201ENST00000584070 92 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 YPEL5P2-201ENST00000605553 359 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 AC002044.1-201ENST00000606707 158 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.93□□□□□ -1.94
ABCD3P28288 AC103705.1-201ENST00000619013 241 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 RMST_7.1-201ENST00000621935 268 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 MIR7157-201ENST00000635801 60 ntBASIC2.93□□□□□ -1.94
ABCD3P28288 AC073346.2-201ENST00000624724 2058 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 AC008264.2-201ENST00000610193 3731 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
ABCD3P28288 RNU6-451P-201ENST00000362921 107 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 SNORD56.3-201ENST00000363507 71 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 RNU6-525P-201ENST00000363685 104 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
ABCD3P28288 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.92□□□□□ -1.94
ABCD3P28288 Y_RNA.619-201ENST00000410951 90 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 AL096701.2-201ENST00000416920 238 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 ZNF885P-201ENST00000420174 1098 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 ERLEC1P1-201ENST00000433806 578 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 HMGB1P31-201ENST00000437242 427 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCD3P28288 AP001324.2-201ENST00000461163 319 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 RPL21P93-201ENST00000480465 489 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCD3P28288 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.92□□□□□ -1.94
ABCD3P28288 SNORA31.18-201ENST00000517043 134 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCD3P28288 AC103810.1-201ENST00000579873 453 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 MIR5195-201ENST00000583555 115 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 MIR4765-201ENST00000585007 77 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 OR1M4P-201ENST00000589199 287 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 VN1R80P-201ENST00000597126 338 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 NRBF2P5-201ENST00000603087 788 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 AC096772.1-201ENST00000609146 564 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ABCD3P28288 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.92□□□□□ -1.94
ABCD3P28288 AC018692.3-201ENST00000623929 123 ntBASIC2.92□□□□□ -1.94
ABCD3P28288 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
ABCD3P28288 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.92□□□□□ -1.94
ABCD3P28288 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
ABCD3P28288 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ABCD3P28288 Y_RNA.38-201ENST00000362617 102 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 RNU6-78P-201ENST00000362897 107 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 RNU6-877P-201ENST00000383868 107 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 Y_RNA.453-201ENST00000384223 109 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 RNU6-843P-201ENST00000384454 104 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 SNORD116-20-201ENST00000384529 92 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 MIR548F1-201ENST00000408667 84 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.91□□□□□ -1.94
ABCD3P28288 FABP5P14-201ENST00000437273 393 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 RPS3AP12-201ENST00000443616 753 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 RNU6-1208P-201ENST00000459588 107 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.91□□□□□ -1.94
ABCD3P28288 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 AC011352.1-201ENST00000512300 793 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 RNA5SP112-201ENST00000515937 99 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 SNORA14.1-201ENST00000516113 141 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 BTF3P12-201ENST00000519620 469 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AC245166.1-201ENST00000521012 253 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.91□□□□□ -1.94
ABCD3P28288 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AC012493.2-201ENST00000595083 291 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AC092747.3-201ENST00000603769 301 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AL442067.2-201ENST00000614033 363 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 U6atac.1-201ENST00000616025 117 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 ATP5A1P2-202ENST00000616464 443 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.91□□□□□ -1.94
ABCD3P28288 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 MIR3651-201ENST00000630427 90 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.91□□□□□ -1.94
ABCD3P28288 MIR3688-2-201ENST00000636963 87 ntBASIC2.91□□□□□ -1.94
ABCD3P28288 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ABCD3P28288 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ABCD3P28288 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.91□□□□□ -1.94
ABCD3P28288 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms