Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-1088P-201ENST00000516850 104 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AC023632.4-201ENST00000517783 191 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AC134698.4-201ENST00000523451 826 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFSF4P23510 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFSF4P23510 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFSF4P23510 SCOCP1-201ENST00000554676 349 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFSF4P23510 AC138761.3-201ENST00000579993 334 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AC090897.2-201ENST00000581715 130 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 MIR4765-201ENST00000585007 77 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFSF4P23510 BRDTP1-201ENST00000605735 677 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AL355073.2-201ENST00000612106 557 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFSF4P23510 AL008636.1-201ENST00000625038 1018 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AP000553.6-201ENST00000641242 118 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFSF4P23510 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TNFSF4P23510 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFSF4P23510 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
TNFSF4P23510 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF4P23510 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF4P23510 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF4P23510 RNU1-18P-201ENST00000363062 164 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 RNU6-293P-201ENST00000411259 106 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFSF4P23510 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.16□□□□□ -1.9
TNFSF4P23510 FABP5P14-201ENST00000437273 393 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF4P23510 NOTCH2P1-201ENST00000443481 624 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF4P23510 RPS3AP46-201ENST00000448352 682 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 U8.21-201ENST00000459536 136 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 RN7SL93P-201ENST00000463035 293 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFSF4P23510 RNA5SP112-201ENST00000515937 99 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 RNA5SP208-201ENST00000516156 78 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 RNA5SP454-201ENST00000517231 127 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF4P23510 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.16□□□□□ -1.9
TNFSF4P23510 TRAV32-201ENST00000553993 340 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 AC105137.2-201ENST00000569073 466 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.16□□□□□ -1.9
TNFSF4P23510 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.16□□□□□ -1.9
TNFSF4P23510 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.16□□□□□ -1.9
TNFSF4P23510 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF4P23510 SRGNP1-201ENST00000603392 451 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 AC092794.2-201ENST00000620933 563 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 MIR7515-201ENST00000637837 67 ntBASIC3.16□□□□□ -1.9
TNFSF4P23510 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF4P23510 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
TNFSF4P23510 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFSF4P23510 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF4P23510 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF4P23510 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFSF4P23510 MTND4P23-201ENST00000447723 1363 ntBASIC3.15□□□□□ -1.9
TNFSF4P23510 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFSF4P23510 SNORD114-19-201ENST00000363072 75 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 AC007969.2-201ENST00000441891 191 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFSF4P23510 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFSF4P23510 AMD1P1-201ENST00000457220 922 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 AC130509.1-201ENST00000464158 433 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 RPL36AP48-201ENST00000485521 314 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 AC018437.1-201ENST00000492214 406 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 BTF3L4P4-201ENST00000506381 449 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFSF4P23510 RN7SKP18-201ENST00000516005 275 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 Y_RNA.702-201ENST00000516843 96 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 SCARNA14-201ENST00000516903 136 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 SNORA31.18-201ENST00000517043 134 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.15□□□□□ -1.91
TNFSF4P23510 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.15□□□□□ -1.91
TNFSF4P23510 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 uc_338.15-201ENST00000615470 191 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 AC097372.5-201ENST00000623665 376 ntBASIC3.15□□□□□ -1.91
TNFSF4P23510 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.15□□□□□ -1.91
TNFSF4P23510 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
TNFSF4P23510 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TNFSF4P23510 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.14□□□□□ -1.91
TNFSF4P23510 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF4P23510 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF4P23510 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF4P23510 RNU6-1010P-201ENST00000362757 107 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 RNU6-933P-201ENST00000384424 107 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 RNU6-95P-201ENST00000384697 107 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 PTMAP2-201ENST00000397627 327 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TNFSF4P23510 AL513475.1-201ENST00000406602 315 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AL030996.1-201ENST00000411430 235 ntBASIC3.14□□□□□ -1.91
TNFSF4P23510 AC138623.1-201ENST00000418060 216 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms