Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPS27AP10-201ENST00000496103 208 ntBASIC2.7□□□□□ -1.98
CDH3P22223 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 RNA5SP356-201ENST00000515972 94 ntBASIC2.7□□□□□ -1.98
CDH3P22223 Y_RNA.704-201ENST00000516851 102 ntBASIC2.7□□□□□ -1.98
CDH3P22223 RNU6-835P-201ENST00000516974 104 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AC025755.1-201ENST00000521306 278 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH3P22223 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH3P22223 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH3P22223 ZNF519P2-201ENST00000557032 169 ntBASIC2.7□□□□□ -1.98
CDH3P22223 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH3P22223 AC005498.1-201ENST00000592125 465 ntBASIC2.7□□□□□ -1.98
CDH3P22223 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH3P22223 AC025165.5-201ENST00000602802 578 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AL138889.2-201ENST00000603883 242 ntBASIC2.7□□□□□ -1.98
CDH3P22223 U4.5-201ENST00000617137 123 ntBASIC2.7□□□□□ -1.98
CDH3P22223 uc_338.11-201ENST00000619132 160 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AC010338.1-201ENST00000621823 717 ntBASIC2.7□□□□□ -1.98
CDH3P22223 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH3P22223 MTND4P35-201ENST00000604257 1375 ntBASIC2.7□□□□□ -1.98
CDH3P22223 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CDH3P22223 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH3P22223 AC027514.1-201ENST00000588561 1603 ntBASIC2.69□□□□□ -1.98
CDH3P22223 NACAP2-201ENST00000318548 624 ntBASIC2.69□□□□□ -1.98
CDH3P22223 Y_RNA.33-201ENST00000362591 102 ntBASIC2.69□□□□□ -1.98
CDH3P22223 RNU6-371P-201ENST00000364283 108 ntBASIC2.69□□□□□ -1.98
CDH3P22223 Y_RNA.255-201ENST00000364581 97 ntBASIC2.69□□□□□ -1.98
CDH3P22223 RNU6-483P-201ENST00000384088 108 ntBASIC2.69□□□□□ -1.98
CDH3P22223 Y_RNA.481-201ENST00000384373 102 ntBASIC2.69□□□□□ -1.98
CDH3P22223 Y_RNA.510-201ENST00000384511 114 ntBASIC2.69□□□□□ -1.98
CDH3P22223 MIR578-201ENST00000384828 96 ntBASIC2.69□□□□□ -1.98
CDH3P22223 MIR592-201ENST00000384959 97 ntBASIC2.69□□□□□ -1.98
CDH3P22223 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.69□□□□□ -1.98
CDH3P22223 AL590002.1-201ENST00000406554 418 ntBASIC2.69□□□□□ -1.98
CDH3P22223 RNU2-29P-201ENST00000410423 189 ntBASIC2.69□□□□□ -1.98
CDH3P22223 RNU4-46P-201ENST00000410818 138 ntBASIC2.69□□□□□ -1.98
CDH3P22223 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH3P22223 RPL26P27-201ENST00000414397 437 ntBASIC2.69□□□□□ -1.98
CDH3P22223 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH3P22223 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH3P22223 BRK1P2-201ENST00000442875 223 ntBASIC2.69□□□□□ -1.98
CDH3P22223 RPS15AP27-201ENST00000449183 343 ntBASIC2.69□□□□□ -1.98
CDH3P22223 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDH3P22223 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH3P22223 RPL26P9-201ENST00000457466 433 ntBASIC2.69□□□□□ -1.98
CDH3P22223 SNORA59A-201ENST00000459326 152 ntBASIC2.69□□□□□ -1.98
CDH3P22223 AL163973.1-201ENST00000484753 577 ntBASIC2.69□□□□□ -1.98
CDH3P22223 RPL36AP51-201ENST00000487216 318 ntBASIC2.69□□□□□ -1.98
CDH3P22223 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH3P22223 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH3P22223 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.69□□□□□ -1.98
CDH3P22223 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH3P22223 AL512310.1-201ENST00000548639 172 ntBASIC2.69□□□□□ -1.98
CDH3P22223 HIF1AP1-201ENST00000553642 175 ntBASIC2.69□□□□□ -1.98
CDH3P22223 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH3P22223 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH3P22223 AC025678.1-201ENST00000567861 338 ntBASIC2.69□□□□□ -1.98
CDH3P22223 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH3P22223 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH3P22223 ATP1B3P1-201ENST00000605365 821 ntBASIC2.69□□□□□ -1.98
CDH3P22223 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH3P22223 MTND4P5-201ENST00000435821 1374 ntBASIC2.69□□□□□ -1.98
CDH3P22223 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH3P22223 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH3P22223 ELF2P3-201ENST00000445099 1506 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC092593.1-201ENST00000515413 1815 ntBASIC2.68□□□□□ -1.98
CDH3P22223 SNORD3E-201ENST00000362899 217 ntBASIC2.68□□□□□ -1.98
CDH3P22223 RNU6-1090P-201ENST00000364065 94 ntBASIC2.68□□□□□ -1.98
CDH3P22223 SNORA68.1-201ENST00000364537 132 ntBASIC2.68□□□□□ -1.98
CDH3P22223 RNU6-395P-201ENST00000365662 106 ntBASIC2.68□□□□□ -1.98
CDH3P22223 SNORA69-201ENST00000383895 132 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.68□□□□□ -1.98
CDH3P22223 USP9YP6-201ENST00000413550 854 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AL353729.1-201ENST00000425044 720 ntBASIC2.68□□□□□ -1.98
CDH3P22223 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH3P22223 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH3P22223 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH3P22223 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH3P22223 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.68□□□□□ -1.98
CDH3P22223 AL513043.1-201ENST00000439124 535 ntBASIC2.68□□□□□ -1.98
CDH3P22223 RNU6-261P-201ENST00000459506 102 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AP000852.1-201ENST00000472460 573 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH3P22223 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH3P22223 AC112206.3-201ENST00000514578 389 ntBASIC2.68□□□□□ -1.98
CDH3P22223 RN7SKP132-201ENST00000516001 208 ntBASIC2.68□□□□□ -1.98
CDH3P22223 RNU1-104P-201ENST00000517280 175 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC109329.2-201ENST00000519658 482 ntBASIC2.68□□□□□ -1.98
CDH3P22223 OR5AQ1P-201ENST00000527596 927 ntBASIC2.68□□□□□ -1.98
CDH3P22223 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDH3P22223 GLYCAM1-201ENST00000546596 285 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH3P22223 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH3P22223 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
CDH3P22223 MIR3616-201ENST00000584070 92 ntBASIC2.68□□□□□ -1.98
CDH3P22223 MIR548AC-201ENST00000585049 88 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.68□□□□□ -1.98
CDH3P22223 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
CDH3P22223 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms