Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-1220P-201ENST00000517126 108 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPA1P20036 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DPA1P20036 CR383656.8-201ENST00000549046 145 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPA1P20036 MIR5007-201ENST00000583098 95 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AC008521.1-201ENST00000587471 187 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 BNIP3P8-201ENST00000597863 560 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AL670379.4-201ENST00000605279 254 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 NDUFA8P1-201ENST00000605525 367 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AC007336.1-201ENST00000576365 3828 ntBASIC2.36□□□□□ -2.03
HLA-DPA1P20036 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 RNU6-61P-201ENST00000365528 109 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AL445529.1-201ENST00000398713 389 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AL355497.1-201ENST00000406262 551 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 RNA5SP508-201ENST00000411327 119 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AL031779.1-201ENST00000415663 330 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AC008267.5-201ENST00000424928 265 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 SNRPFP4-201ENST00000456366 242 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 RAP1BP2-201ENST00000478270 544 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 SNORA4.4-201ENST00000515921 135 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 SNORA48.11-201ENST00000517015 89 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 SNORA31.25-201ENST00000517242 134 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 MIR4760-201ENST00000585040 80 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AL121917.1-203ENST00000605534 577 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
HLA-DPA1P20036 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPA1P20036 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 RNU6-1010P-201ENST00000362757 107 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 XGY1-201ENST00000381172 446 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 SNORD116-20-201ENST00000384529 92 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 SNORA11.2-201ENST00000408318 127 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC104850.1-201ENST00000435940 476 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 PGBD4P3-201ENST00000440731 581 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 MTND6P13-201ENST00000443510 523 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 RNU2-53P-201ENST00000516257 147 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 Y_RNA.687-201ENST00000516558 91 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC109329.1-201ENST00000518744 317 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 uc_338.15-201ENST00000615470 191 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC108479.2-201ENST00000617314 601 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DPA1P20036 SCARNA4-202ENST00000625402 129 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 AC019226.2-201ENST00000625973 424 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 HAUS6P2-201ENST00000433254 2404 ntBASIC2.34□□□□□ -2.03
HLA-DPA1P20036 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
HLA-DPA1P20036 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
HLA-DPA1P20036 RNU6-179P-201ENST00000363350 107 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 RNU6-487P-201ENST00000365430 104 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 RNU5A-2P-201ENST00000384337 116 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 MIR186-201ENST00000384988 86 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AL591034.2-201ENST00000402839 359 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 PGBD4P6-201ENST00000421501 610 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC055731.1-201ENST00000474387 401 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC004263.1-201ENST00000479327 332 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC109486.1-201ENST00000486833 374 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC008413.1-201ENST00000511864 177 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 SCARNA24.1-201ENST00000516465 137 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 Vault.3-201ENST00000516676 95 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 MTCYBP20-201ENST00000524239 1129 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 RANP3-201ENST00000530970 276 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC087241.2-201ENST00000535801 324 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AP002770.2-201ENST00000543613 532 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AL121992.2-201ENST00000606262 256 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DPA1P20036 AC023510.2-201ENST00000622162 746 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms