Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AP001486.1-201ENST00000463339 476 ntBASIC2.64□□□□□ -1.99
ERCC2P18074 AIG1P1-201ENST00000503376 148 ntBASIC2.64□□□□□ -1.99
ERCC2P18074 MTND3P25-201ENST00000509243 135 ntBASIC2.64□□□□□ -1.99
ERCC2P18074 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.64□□□□□ -1.99
ERCC2P18074 SNORA25.11-201ENST00000515935 105 ntBASIC2.64□□□□□ -1.99
ERCC2P18074 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.64□□□□□ -1.99
ERCC2P18074 CKS1BP7-201ENST00000522230 235 ntBASIC2.64□□□□□ -1.99
ERCC2P18074 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.64□□□□□ -1.99
ERCC2P18074 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.64□□□□□ -1.99
ERCC2P18074 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ERCC2P18074 AC097065.2-201ENST00000608159 533 ntBASIC2.64□□□□□ -1.99
ERCC2P18074 AC138627.2-201ENST00000624202 601 ntBASIC2.64□□□□□ -1.99
ERCC2P18074 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.64□□□□□ -1.99
ERCC2P18074 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
ERCC2P18074 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ERCC2P18074 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
ERCC2P18074 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
ERCC2P18074 RNU6-942P-201ENST00000363002 107 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 Y_RNA.159-201ENST00000363674 87 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 RNU6-1119P-201ENST00000384349 108 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 RNU6-606P-201ENST00000384721 111 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ERCC2P18074 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ERCC2P18074 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.63□□□□□ -1.99
ERCC2P18074 MTATP6P18-201ENST00000417994 673 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.63□□□□□ -1.99
ERCC2P18074 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.63□□□□□ -1.99
ERCC2P18074 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.63□□□□□ -1.99
ERCC2P18074 BX276092.3-201ENST00000424182 230 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.63□□□□□ -1.99
ERCC2P18074 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.63□□□□□ -1.99
ERCC2P18074 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.63□□□□□ -1.99
ERCC2P18074 MTND1P29-201ENST00000448112 647 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 MTND1P18-201ENST00000448191 573 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 AL109933.2-201ENST00000452651 260 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.63□□□□□ -1.99
ERCC2P18074 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.63□□□□□ -1.99
ERCC2P18074 AL049873.1-201ENST00000480540 376 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 RPL36AP48-201ENST00000485521 314 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 HMGB1P30-201ENST00000492455 606 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 AC114781.4-201ENST00000513707 639 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 RNA5SP112-201ENST00000515937 99 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 AC010186.2-204ENST00000537668 439 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
ERCC2P18074 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.63□□□□□ -1.99
ERCC2P18074 AC009163.5-201ENST00000575421 637 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 MIR4703-201ENST00000577728 79 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.63□□□□□ -1.99
ERCC2P18074 AC008945.2-201ENST00000606056 604 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 AL359198.2-201ENST00000611836 194 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 AC092608.2-201ENST00000624427 218 ntBASIC2.63□□□□□ -1.99
ERCC2P18074 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.63□□□□□ -1.99
ERCC2P18074 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.63□□□□□ -1.99
ERCC2P18074 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.63□□□□□ -1.99
ERCC2P18074 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ERCC2P18074 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
ERCC2P18074 RNU6-1120P-201ENST00000362988 108 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 RNU6-486P-201ENST00000363116 107 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 CALM1P1-201ENST00000442082 433 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.62□□□□□ -1.99
ERCC2P18074 AL118520.1-201ENST00000450770 291 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC112771.1-201ENST00000463581 102 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 RPS3AP17-201ENST00000472594 777 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 MTAPP1-201ENST00000489154 819 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 SRIP1-201ENST00000489235 288 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC079382.1-201ENST00000493346 557 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC092436.1-201ENST00000506450 503 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC010493.1-201ENST00000513479 292 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 MIR892C-201ENST00000516410 77 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 Y_RNA.687-201ENST00000516558 91 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 RNU5B-3P-201ENST00000516601 115 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 RNU6-1178P-201ENST00000516674 107 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AP004607.1-201ENST00000524456 203 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC023824.2-201ENST00000566185 400 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.62□□□□□ -1.99
ERCC2P18074 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.62□□□□□ -1.99
ERCC2P18074 MTND1P15-201ENST00000579262 949 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC008536.2-201ENST00000607284 349 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC009090.3-201ENST00000616553 565 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AC048344.4-201ENST00000619744 527 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 SCARNA15.3-201ENST00000626315 122 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 SCARNA4.1-201ENST00000628597 123 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.62□□□□□ -1.99
ERCC2P18074 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.62□□□□□ -1.99
ERCC2P18074 ZNF680P1-201ENST00000436625 1469 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 Z75746.1-201ENST00000440243 2080 ntBASIC2.62□□□□□ -1.99
ERCC2P18074 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ERCC2P18074 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.61□□□□□ -1.99
ERCC2P18074 AC080100.1-201ENST00000624239 5356 ntBASIC2.61□□□□□ -1.99
ERCC2P18074 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ERCC2P18074 RNU6-715P-201ENST00000365204 103 ntBASIC2.61□□□□□ -1.99
ERCC2P18074 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ERCC2P18074 RNU6-45P-201ENST00000384471 107 ntBASIC2.61□□□□□ -1.99
ERCC2P18074 MIR196B-201ENST00000384852 84 ntBASIC2.61□□□□□ -1.99
ERCC2P18074 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
ERCC2P18074 AC097463.2-201ENST00000421074 142 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms