Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.96□□□□□ -2.1
NCK1P16333 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.96□□□□□ -2.1
NCK1P16333 AL583843.1-201ENST00000456070 346 ntBASIC1.96□□□□□ -2.1
NCK1P16333 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.96□□□□□ -2.1
NCK1P16333 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.96□□□□□ -2.1
NCK1P16333 RPL30P6-201ENST00000475925 342 ntBASIC1.96□□□□□ -2.1
NCK1P16333 SCARNA16.3-201ENST00000516595 184 ntBASIC1.96□□□□□ -2.1
NCK1P16333 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.96□□□□□ -2.1
NCK1P16333 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.96□□□□□ -2.1
NCK1P16333 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.96□□□□□ -2.1
NCK1P16333 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.96□□□□□ -2.1
NCK1P16333 AC105129.3-201ENST00000605455 485 ntBASIC1.96□□□□□ -2.1
NCK1P16333 AC012409.4-201ENST00000612923 249 ntBASIC1.96□□□□□ -2.1
NCK1P16333 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
NCK1P16333 CTSLP2-204ENST00000629029 392 ntBASIC1.96□□□□□ -2.1
NCK1P16333 AC092192.1-201ENST00000633154 1018 ntBASIC1.96□□□□□ -2.1
NCK1P16333 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
NCK1P16333 U3.12-201ENST00000364498 214 ntBASIC1.95□□□□□ -2.1
NCK1P16333 SNORD14B-201ENST00000364533 90 ntBASIC1.95□□□□□ -2.1
NCK1P16333 RNU5E-5P-201ENST00000365379 116 ntBASIC1.95□□□□□ -2.1
NCK1P16333 RPL23AP32-201ENST00000395315 459 ntBASIC1.95□□□□□ -2.1
NCK1P16333 RNA5SP390-201ENST00000410191 113 ntBASIC1.95□□□□□ -2.1
NCK1P16333 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AC016831.2-201ENST00000417179 352 ntBASIC1.95□□□□□ -2.1
NCK1P16333 MTCO3P5-201ENST00000433620 714 ntBASIC1.95□□□□□ -2.1
NCK1P16333 RPL32P28-201ENST00000443577 397 ntBASIC1.95□□□□□ -2.1
NCK1P16333 KATNBL1P6-201ENST00000453433 915 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.95□□□□□ -2.1
NCK1P16333 HMGB1P30-201ENST00000492455 606 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.95□□□□□ -2.1
NCK1P16333 AC117522.1-201ENST00000509821 380 ntBASIC1.95□□□□□ -2.1
NCK1P16333 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.95□□□□□ -2.1
NCK1P16333 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
NCK1P16333 NDUFA5P6-201ENST00000542110 379 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.95□□□□□ -2.1
NCK1P16333 AC027807.1-201ENST00000559921 996 ntBASIC1.95□□□□□ -2.1
NCK1P16333 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.95□□□□□ -2.1
NCK1P16333 MIR548AC-201ENST00000585049 88 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AC112191.3-201ENST00000604371 277 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AC021646.1-201ENST00000605469 484 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AL031601.2-202ENST00000622650 282 ntBASIC1.95□□□□□ -2.1
NCK1P16333 IGHVIII-44-202ENST00000636235 289 ntBASIC1.95□□□□□ -2.1
NCK1P16333 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
NCK1P16333 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.95□□□□□ -2.1
NCK1P16333 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.94□□□□□ -2.1
NCK1P16333 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.94□□□□□ -2.1
NCK1P16333 SNORA25B-201ENST00000365507 128 ntBASIC1.94□□□□□ -2.1
NCK1P16333 U3.40-201ENST00000408706 208 ntBASIC1.94□□□□□ -2.1
NCK1P16333 RNU2-39P-201ENST00000410604 198 ntBASIC1.94□□□□□ -2.1
NCK1P16333 RNA5SP508-201ENST00000411327 119 ntBASIC1.94□□□□□ -2.1
NCK1P16333 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.94□□□□□ -2.1
NCK1P16333 MTCYBP5-201ENST00000423752 1135 ntBASIC1.94□□□□□ -2.1
NCK1P16333 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AL593851.1-201ENST00000426171 157 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AL589872.1-201ENST00000426602 288 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC027124.2-201ENST00000428249 105 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.94□□□□□ -2.1
NCK1P16333 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.94□□□□□ -2.1
NCK1P16333 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.94□□□□□ -2.1
NCK1P16333 PSPHP1-201ENST00000450062 261 ntBASIC1.94□□□□□ -2.1
NCK1P16333 USP9YP12-201ENST00000450481 570 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.94□□□□□ -2.1
NCK1P16333 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
NCK1P16333 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC005178.1-201ENST00000508392 440 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.94□□□□□ -2.1
NCK1P16333 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.94□□□□□ -2.1
NCK1P16333 AC112206.3-201ENST00000514578 389 ntBASIC1.94□□□□□ -2.1
NCK1P16333 RNU6-1129P-201ENST00000515964 104 ntBASIC1.94□□□□□ -2.1
NCK1P16333 Y_RNA.672-201ENST00000516289 104 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.94□□□□□ -2.1
NCK1P16333 AC034114.1-201ENST00000520293 285 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AP003181.2-201ENST00000528941 181 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.94□□□□□ -2.1
NCK1P16333 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.94□□□□□ -2.1
NCK1P16333 IMMP1LP2-201ENST00000552954 492 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.94□□□□□ -2.1
NCK1P16333 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AL109918.3-201ENST00000603072 338 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC073410.2-201ENST00000603240 332 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC116312.1-201ENST00000606841 314 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.94□□□□□ -2.1
NCK1P16333 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
NCK1P16333 AC099654.13-201ENST00000639774 207 ntBASIC1.94□□□□□ -2.1
NCK1P16333 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NCK1P16333 MTND5P6-201ENST00000422338 1798 ntBASIC1.94□□□□□ -2.1
NCK1P16333 RBBP8P1-201ENST00000449447 1844 ntBASIC1.94□□□□□ -2.1
NCK1P16333 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.93□□□□□ -2.1
NCK1P16333 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
NCK1P16333 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NCK1P16333 MIR449A-201ENST00000362113 91 ntBASIC1.93□□□□□ -2.1
NCK1P16333 RNU5E-1-201ENST00000362477 120 ntBASIC1.93□□□□□ -2.1
NCK1P16333 RNU1-91P-201ENST00000364746 163 ntBASIC1.93□□□□□ -2.1
NCK1P16333 RNU6-622P-201ENST00000384272 103 ntBASIC1.93□□□□□ -2.1
NCK1P16333 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
NCK1P16333 HMGN2P39-201ENST00000398005 273 ntBASIC1.93□□□□□ -2.1
NCK1P16333 BTF3P7-201ENST00000407097 488 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AL031779.1-201ENST00000415663 330 ntBASIC1.93□□□□□ -2.1
NCK1P16333 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms