| MUC1 | P15941 | Y_RNA.359-201 | ENST00000365498 | 102 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | SNORA24.1-201 | ENST00000384401 | 135 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MIR558-201 | ENST00000384920 | 94 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | LINC01312-201 | ENST00000412745 | 775 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | C1DP2-201 | ENST00000418167 | 426 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MTCO2P34-201 | ENST00000421994 | 607 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | ABCC5-AS1-201 | ENST00000422946 | 469 nt | TSL 2 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL162400.2-201 | ENST00000427547 | 157 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | GYPB-201 | ENST00000429670 | 239 nt | TSL 1 (best) BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RPL23AP30-201 | ENST00000432419 | 501 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | SMG7-AS1-202 | ENST00000432837 | 466 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL591212.2-201 | ENST00000433923 | 257 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC004869.2-201 | ENST00000436501 | 229 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | GHRL-208 | ENST00000439975 | 326 nt | TSL 1 (best) BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC079448.1-201 | ENST00000449377 | 373 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MTND1P27-201 | ENST00000451117 | 902 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL358075.2-201 | ENST00000452785 | 339 nt | TSL 2 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RPL26P9-201 | ENST00000457466 | 433 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNU6-953P-201 | ENST00000459154 | 107 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RPL37P6-201 | ENST00000460682 | 294 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC114786.4-201 | ENST00000508771 | 728 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RPS3A-208 | ENST00000509736 | 576 nt | TSL 2 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC117522.2-201 | ENST00000510049 | 657 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC034223.1-201 | ENST00000511054 | 599 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MTCO3P28-201 | ENST00000513351 | 515 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC126768.3-201 | ENST00000514519 | 560 nt | TSL 4 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC093206.1-201 | ENST00000515364 | 497 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC068880.3-201 | ENST00000519185 | 179 nt | TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AP003465.1-201 | ENST00000520575 | 382 nt | TSL 2 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AP000873.5-201 | ENST00000533906 | 236 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC090531.1-202 | ENST00000548450 | 499 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL352984.1-201 | ENST00000556949 | 276 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC087463.2-201 | ENST00000565943 | 472 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | LINC2194-202 | ENST00000567624 | 506 nt | TSL 3 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC012213.3-201 | ENST00000577199 | 777 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | LRRC37A5P-203 | ENST00000580181 | 585 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MIR3935-201 | ENST00000583472 | 104 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MIR3117-201 | ENST00000584034 | 78 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC104365.1-201 | ENST00000588835 | 394 nt | TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | BNIP3P9-201 | ENST00000603714 | 553 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MIR98-201 | ENST00000606724 | 119 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MIR15A-201 | ENST00000607334 | 83 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | DUSP12P1-201 | ENST00000612874 | 516 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL162373.1-201 | ENST00000620433 | 407 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC008781.3-201 | ENST00000622826 | 335 nt | TSL 2 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AP003399.1-201 | ENST00000637534 | 361 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | PTPRQ-209 | ENST00000616559 | 8165 nt | TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC103993.1-201 | ENST00000521500 | 1584 nt | TSL 5 BASIC | 1.8 | □□□□□ -2.12 | | |
| MUC1 | P15941 | OR5K1-202 | ENST00000642057 | 3466 nt | APPRIS P1 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | Y_RNA.51-201 | ENST00000362725 | 102 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNY1P12-201 | ENST00000364251 | 105 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNU6-641P-201 | ENST00000384006 | 107 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNU2-39P-201 | ENST00000410604 | 198 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL138737.1-202 | ENST00000418834 | 876 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | BPY2DP-201 | ENST00000422208 | 265 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC007566.1-201 | ENST00000427458 | 643 nt | TSL 5 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MED13P1-201 | ENST00000428342 | 171 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL139415.2-201 | ENST00000431968 | 163 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MTATP6P16-201 | ENST00000434543 | 526 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MTND4P32-201 | ENST00000437189 | 1237 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | KATNBL1P3-201 | ENST00000443475 | 909 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC096638.1-201 | ENST00000444678 | 216 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL136380.1-201 | ENST00000447970 | 162 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | FABP5P13-201 | ENST00000452144 | 328 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL359915.2-203 | ENST00000457043 | 540 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | KLF3P2-201 | ENST00000465138 | 268 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC012055.2-201 | ENST00000504167 | 335 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RPL23AP94-201 | ENST00000512518 | 302 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC008549.1-201 | ENST00000512900 | 643 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNU6-677P-201 | ENST00000516914 | 101 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC009902.1-201 | ENST00000519351 | 183 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | CPSF6-207 | ENST00000551516 | 234 nt | TSL 2 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC073591.1-201 | ENST00000552736 | 597 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | LINC02461-201 | ENST00000553211 | 836 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC020661.3-201 | ENST00000558101 | 414 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC126407.1-201 | ENST00000563044 | 566 nt | TSL 4 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL512625.3-207 | ENST00000609749 | 477 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | DLEU2_1.1-201 | ENST00000612089 | 120 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC008498.1-201 | ENST00000613012 | 531 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC004852.3-201 | ENST00000614131 | 326 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | DLEU2_1.2-201 | ENST00000614667 | 120 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL512643.1-201 | ENST00000635735 | 524 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | MIR219B-201 | ENST00000637023 | 88 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| MUC1 | P15941 | CYLC2-202 | ENST00000487798 | 2053 nt | APPRIS P1 TSL 5 BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | TRIQK-204 | ENST00000517858 | 1882 nt | TSL 3 BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | TSHB-202 | ENST00000369517 | 474 nt | APPRIS P1 TSL 1 (best) BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNU6-190P-201 | ENST00000384154 | 102 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | DEFB108C-201 | ENST00000400154 | 252 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL513475.1-201 | ENST00000406602 | 315 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNU6ATAC37P-201 | ENST00000408328 | 131 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | RNU2-49P-201 | ENST00000410666 | 184 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | LINC00301-202 | ENST00000412599 | 772 nt | TSL 1 (best) BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC093911.1-201 | ENST00000419129 | 552 nt | TSL 4 BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AL109913.1-201 | ENST00000421173 | 514 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| MUC1 | P15941 | AC016710.1-201 | ENST00000421326 | 466 nt | TSL 3 BASIC | 1.78 | □□□□□ -2.12 | | |